Research Study Seeking Gardeners in Lane or Linn Counties

This note comes from our collaborator at the University of Oregon, Dr. Gwynne Mhuireach. Dr. Mhuireach previously worked with our lab and local gardeners to document soil microbial communities, and the extent to which the act of gardening transfers soil microbes to gardeners’ skin ~ thus affecting the skin microbiome!

At the conclusion of the skin microbiome study, many gardeners asked for more information on how gardening affects the gut microbiome. Dr. Mhuireach received USDA funding to conduct a pilot study, to address this question. Gardeners in Linn and Lane Counties are specifically invited to apply.

The deadline to apply to participate in this NEW study is August 15th.


We are seeking healthy adult gardeners to engage in a research study exploring microbiota of fresh fruits and vegetables from gardens and supermarkets, and their potential to influence the gut microbiome. To be eligible, you must be between the ages of 18–45, be fluent in English, live in Lane or Linn County, and have access to a garden that can provide enough fruits and vegetables for the diet intervention. Participants will receive $50 at the beginning of the study, $50 upon completion, and a $75 allowance to purchase supermarket fruits and vegetables.

Study activities: If you participate, you will be asked to undergo two week-long diet intervention periods during which you will eat the USDA-recommended amount of fruits and vegetables. In one period all of the produce should be sourced from your garden and in the other the same produce should be sourced from a supermarket. You will be also asked to pre-plan your meals for the intervention periods, complete a Lifestyle, Health, & Diet Questionnaire, maintain a Daily Fruit & Vegetable Log, collect samples of all the fruits and vegetables you eat, collect stool (fecal) samples, and collect a tapwater sample. The total duration of participation is 24 days, with an expected average time commitment of 20–30 minutes per day.

Potential risks: Participants will be exposed to microorganisms from garden and supermarket produce, however, this exposure occurs during normal daily life. There is also a risk that privacy or confidentiality could be breached, though precautions will be taken to avoid such breaches.

Benefits: There are no direct benefits to participating in this study.

To see if you are eligible, please use this Qualtrics link (https://oregon.qualtrics.com/jfe/form/SV_9Gn0UOtZEbzWEh8) to take a brief screening survey. More information is available at www.gffstudy.com.

A place setting, on top of soil. In place of a plate is a shovel head full of vegetables.
Organic farm to table healthy eating concept on soil background.

Garden Ecology Lab Research Update

COVID-19 has impacted our research in many different ways, including making it more difficult to find time to provide research updates on a regular basis. Despite the long silence, we have many projects up and running this summer! In fact, we’re launching four new projects, finishing up three long-term projects, and writing up another two projects.

In this blog post, I give a brief overview of the four new Garden Ecology Lab projects that launched this summer.

Microbiome of Garden Soils and Gardeners: Dr. Gwynne Mhuireach’s project has been spotlighted in a recent blog post and webinar. She has selected the 40 gardeners that will be included in her study: 20 high desert and 20 Willamette Valley gardeners, half of whom are organic and half of whom are conventional gardeners. Soon, these gardeners will be sending in their soil and skin swab samples. And then, the long process of analysis will begin.

She’s studying the microbe community in garden soils, and how those might differ according to garden region (Willamette Valley or high desert) and gardening practices (organic versus conventional soil managmeent). She’s also studying whether garden soil microbes transfer to gardeners’ skin during the act of gardening, and if so, how long those microbes persist on the skin.

Pollinators on Native Plants and Native Cultivars: Jen Hayes is well into the data collection phase of her first field season. She is working with undrgraduates Jay Stiller, Tyler Spofford, and Isabella Messer to: track flowering phenology, measure floral traits, observe pollinator visits to study plots, and collect pollinators so that they can later be curated and identified to species. Jen has written about her research project, in a past blog post. I’ve also set up a Flickr album to host photos from her study.

Native plant and nativar study site, at the Oak Creek Center for Urban Horticulture. A yarrow cultivar, ‘Salmon Beauty’, can be seen in the foreground. Nemophila, Clarkia, and Escholzia cultivars can be seen in the background.

Jen’s field site is located at the Oak Creek Center for Urban Horticulture at OSU, which makes it so much easier for undergraduate student researchers to participate in this project. She samples pollinators on Tuesdays and Fridays. She takes 5-minute observations of pollinator visits on Mondays and Thursdays. In between, lots of time is spent weeding and watering plots, counting flowers, and measuring floral traits.

Cost / Benefit Analysis of Growing Edible Plants in Containers: Tyler Spofford is a new lab member, who is completing his undergraduate degree in the BioResource Research program at OSU. He is working to develop a ‘budget’ for growing food in low-cost containers. I’ve summarized this ‘budget’ data for growing food in standard vegetable gardens, but no data yet exists (that I can find) for containerized vegetable gardens. Tyler is growing 40 tomato plants across two sizes of containers (3 gallons and 5 gallons), as single plants and in combination with basil. He’s keeping track of all of the costs (both money and time spent to grow food). When he harvests food, he’ll weigh his harvest, and track the economic benefit of his efforts, and how container size and planting configuration (one or two crops per container) influences harvest. I’ve set up a Flickr album for his study, to host project photos.

Tyler’s project grew out of my concern that, even though 18,000+ people enrolled in a free, online vegetable gardening course (over 40,000, at last count) ~ that the people who might be most at risk for food insecurity may not be benefitting from Extension Master Gardener resources and information. Tyler’s project is one component of a larger effort to develop more support for renters who might want to grow their own food.

Bucket gardens, on the day that the tomatoes were planted into 5-gallon BiMart buckets. We tried to keep all materials and plants low cost and easily accessible. Photo Credit: Tyler Spofford.

Below is an excerpt from a concept paper I’m writing on the topic:

We know that the COVID-19 pandemic is exerting stress on multiple pressure points related to the economic and food security of U.S. households: more people are in need of food aid and more people are concerned about food access. The U.S. has a long history of gardening in times of national emergency (e.g. Victory Garden of WW I and WWI II, ‘recession gardens’ of 2008). The benefits of gardening as a tool of economic security and resilience are well-established. However, research suggests that these benefits are largely restricted to homeowners. Currently, most state and local laws afford no legal right to renters who want to grow their own food. Community gardens might offer renters opportunities to grow their own food, except that these gardens are often associated with gentrification. To promote public health in the face of economic and health risks of COVID-19 and future pandemics, it is critical to support the food gardening efforts of the most vulnerable. Those in rental housing have been found to be most vulnerable to food insecurity, as well as the food and economic insecurity associated with natural disasters.

Pollinators on Buddleja Cultivars: Cara Still is studying how breeding butterfly bush (Buddleja davidii cultivars) for sterilty impacts the pollinator community that visits Buddleja blossoms. Buddleja davidii and some fertile varieties of this plant are considered noxious weeds in Oregon, and many other places. Normally, noxious weed status would make it illegal to sell or trade butterfly bush in Oregon. However, the Oregon Department of Agriculture allows exceptions for non-sterile cultivars and interspecific hybrids.

Buddleja ‘Buzz Velvet’ (I suspect that plant breeders have a lot of fun, naming new cultivars)

Cara is studying whether or not the plants that are allowed for sale, under the exceptions, still pose a risk of invasion. Our group is working with Cara to document the abundance and diversity of pollinators that visit eight fertile Buddleja cultivars with 16 cultivars that have been bred for sterility.

When I was initially approached to participate in this project, I thought that it should be obvious that sterile cultivars would not attract pollinators. Afterall, sterile cultivars don’t produce pollen, or produce very little pollen. Without pollen, I doubted that bees would visit the plants. But, it is possible that sterile plants would still produce nectar. And, many pollinators ~ such as butterflies and moths ~ visit plants to consume nectar, rather than pollen.

The more I looked into the literature, I realized that no one has yet studied how breeding for sterility might affect a plant’s attractiveness to pollinators. Would sterile forms of butterfly bush no longer attract butterflies? Would sterile varieties attract syrphid flies that visit blossoms for nectar, and not pollen? We’ll let you know what we find, in about a two years. In the meantime, you may want to visit the Flickr album of photos I set up for Cara’s study.

Link to ‘Garden(er) Microbiome’ Webinar Recording

Thanks to all who signed up for the ‘Citizen Science in the Garden!: Studying the Garden(er) Microbiome’ webinar. The webinar recording can be found below, or via THIS LINK.

If you are interested in participating in this project, please leave your information in this short survey. We will work to get back to everyone who responds, within the next month. Depending upon the volume of interest that we receive, it may take a bit longer.

Thanks to all wanting to learn more about the microbiome of garden soils and gardeners!