Category Archives: research

Markham symposium highlights work of HMSC graduate researchers

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Hatfield Marine Science CenterNEWPORT – The 19th annual Markham Symposium, a celebration of graduate student research and scholarship, will be held at the Oregon State University Hatfield Marine Science Center  in Newport on June 19. This year’s symposium will feature student research presentations in an exciting, fast-paced format.  Poster presentations and an informal reception will give attendees a chance to meet students and their mentors. The event, from 10 am-12:30 pm in the Visitor Center auditorium, is free and open to the public.

Read more about the Symposium in Currents, the HMSC newsletter – now available via RSS feed – and while you’re at it, check out the redesigned HMSC Website.

The  HMSC is celebrating its 47th year as a leading marine laboratory distinguished by its many collaborative research partnerships. Originally established as a marine laboratory for OSU, the center currently hosts research and education programs from seven OSU colleges and six state and federal agencies on a 49-acre campus. on the south shore of Yaquina Bay. The facility is also home to the HMSC Visitor Center, managed by Oregon Sea Grant as a public and K-12 education facility and a social laboratory for OSU’s  Free-Choice Learning Lab.

TERRA: Scientists and Engineers Plan for the Big One

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Terra Magazine cover“The last great earthquake to strike the Pacific Northwest occurred on January 26, 1700, at about 9 p.m. Parts of the coastline dropped three to six feet in an instant. It set off landslides throughout the Oregon Coast Range. Some of them are still moving. If you could hear soil, rocks and trees creep inch-by-inch downhill, some of those sounds would echo that massive jolt. At sea, it generated tsunamis that reshaped the Northwest coastline, traveled across the Pacific and swept through bays and coastal communities in Japan. …”

The latest issue of Terra, Oregon State University’s research magazine, delves into the ways in which OSU scientists and engineers are helping the state prepare for the next big Cascadia Subduction Zone earthquake, which a growing number of researchers calculate could happen within the next 50-100 years. Learn how such a powerful near-short “megathrust” quake could affect the state and region, and what’s being done to plan for, and mitigate against, such disasters.

The spring edition also looks at how people like Oregon Sea Grant’s Tim Miller-Morgan care for the fish and other aquatic animals that make up more than 80 percent of the animals used in the university’s research labs and the public exhibits at the Hatfield Marine Science Center. The past few decades have witnessed great changes in how institutions like OSU treat the animals in their care; as Miller-Morgan puts it, ““Now we understand that we shouldn’t look at these animals as disposable. We brought them into captivity, and we have an obligation to keep them as long as we can, as close to their natural lifespan as possible — or even longer.”

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Oyster shells help restore chemical balance to acid waters

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Healthy young oyster spatThe shells of oysters – a commercially important shellfish whose reproduction and growth is threatened by climate-linked ocean acidification – may help counteract the effects of increased local acidity levels, according to a new study of New England’s Chesapeake Bay by a team of researchers led by Oregon State University’s George Waldbusser.

The study, published in the journal Ecology and reported this week in the New York Times , concludes that the buildup of old shells in undisturbed oyster beds – along with the oysters’ waste – can help restore alkalinity to waters that might otherwise be too acid for the shellfish to survive.

Like ocean waters around the world, the Chesapeake has become more and more acidic as a result of rising levels of carbon dioxide in the atmosphere. Now, by studying oyster populations in relation to acidity levels,Waldbusser’s team has concluded that oysters — particularly their shells — can play a significant role in reducing that acidity.

“Oyster shells are made out of calcium carbonate, so they’re sort of like an antacid pill,” said Waldbusser, an assistant professor of earth, ocean and atmospheric sciences at OSU and an author of the study. “In an undisturbed oyster reef, healthy oysters are generating a lot of biodeposits,” a genteel term for excrement, “which helps generate CO2 to help break down those shells, which helps to regenerate the alkalinity back into the environment.”

Ocean acidification is of great concern to commercial oyster growers. Additional  research by Waldbusser and colleague Burke Hales, conducted at an Oregon oyster hatchery, has shown that increasing acidity near commercial shellfish operations inhibits the larval oysters from developing shells and growing at a pace that makes oyster farming economically viable.

Waldbusser is also working on a Sea Grant-funded project to develop Web-based tools that would allow oyster growers and resource managers to better understand how acidification affects larval oysters so they can more effectively adapt, mitigate and adjust their operations to increase oyster survival and growth.

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Researchers test new excluder device to reduce halibut bycatch

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OSU researchers working with the groundfish fishing industry in the Pacific Northwest have tested a new “flexible sorting grid excluder” – a type of bycatch reduction device that shows promise to significantly reduce the incidental bycatch of Pacific halibut from commercial bottom trawl fishermen. In a series of tests that included 30 tows off the Washington coast, commercial fishermen were able to reduce the number of halibut taken as bycatch by 57 percent, while retaining 84 percent of the targeted groundfishes, according to Mark Lomeli of the Pacific States Marine Fisheries Commission, a multi-state agency charged with sustainably managing Pacific Ocean resources. The findings are being published in the journal Fisheries Research.
Incidental bycatch is a significant issue in many coastal regions including the Pacific Northwest. It occurs when fishing operations result in the discard of non-targeted fish and invertebrates, or through accidental interactions with mammals, seabirds and sea turtles. It is of particular concern, resource managers say, when these “bycaught” species are overfished, threatened or endangered.

Read more at: http://phys.org/news/2013-03-bycatch-groundfish-trawling.html#jCp

Science on Tap: Dan Bottom on sustaining salmon

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Dan BottomNEWPORT – Dan Bottom, fisheries biologist with NOAA’s Northwest Fisheries Science Center, steps up to the bar to talk about salmon at the next Science on Tap event on March 13 at Brewer’s on the Bay.

“Celebrating Diversity: Sustaining Pacific Salmon in a Changing World” is Bottom’s theme for the evening, which takes place in the downstairs Board room at Rogue Ale’s South Beach waterfront location. Doors open at 5:30 p.m. and the talk begins at 6; the event is free and open to the public. Appetizers will be served, and additional food and drinks available for purchase from the menu.

Bottom, editor and contributing author for Oregon Sea Grant’s 2011 book Pathways to Resilience: Sustaining Pacific Salmon in a Changing World, will discuss the importance of salmon diversity and the attributes of resilience. His talk will draw from the book’s 11 peer-reviewed articles, including case studies of salmon and salmon fisheries, and will explore management actions that draw on salmon life history and genetic diversity to maintain salmon populations into the future.

Bottom notes, “Salmon exhibit a wide variety of life history traits. These include salmon runs and populations that exhibit differences in migration timing, duration of estuary rearing and size when the salmon enter the ocean.” Healthy, diverse watersheds, says Bottom, provide habitat connections that not only sustain diverse salmon life histories but also provide diverse social and economic opportunities for people.

The 392-page, full-color book, with a prologue by Governor John Kitzhaber, will be available at the event for purchase and author signing. It can also be purchased online from Oregon Sea Grant.

Science on Tap is a regular program of OSU’s Hatfield Marine Science Center, co-sponsored by Oregon Sea Grant, NOAA, the Pacific States Marine Fisheries Commission, MidCoast Watersheds Council, Native Fish Society, and The Wetlands Conservancy. For more information about the event, call 541-867-0234.

West Coast Sea Grant programs offer social science grant opportunities

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Sea Grant programs in Oregon, Washington and California are inviting regional research proposals that address topics of social science and human dimensions related to Sea Grant’s national goals for

  • Healthy coasts and oceans
  • Safe and sustainable fisheries and aquaculture
  • Resilient coastal communities and economies
  • Environmental literacy and workforce development.

The hope is to attract a wide range of social scientists – economists, anthropologists, geographers, community planners, political scientists, psychologists, sociologists, learning scientists, historians, communications and decision scientists –  to explore some important aspect of human interaction within coastal and marine ecosystems.

Oregon Sea Grant, Washington Sea Grant, California Sea Grant and University of Southern California Sea Grant have pooled their resources to commit a total of $700,000 (subject to available funds) to support between two and four regional projects for 2014-2016.  Projects must be regional in scope and research teams must be made up of investigators from at least two institutions of higher education within the three-state region.

Projects will be selected through an open, competitive, peer-review process. The deadline for pre-proposal applications – which must be made through California Sea Grant – is 11:59 pm PDT, April 1, 2013.

For full information, and to learn how to submit preproposals, visit the California Sea Grant Website.

OSU researcher seeks better rip current forecasts

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Rip current warning signRip currents – strong channels of water flowing seaward from the shore – kill more Americans than do hurricanes. Caught off guard, people are swept out to sea, where they exhaust themselves swimming against the pull of the strong, outrushing current, and drown.

While scientists and the National Weather Service have made progress predicting the probability of rip currents in given locations, they so far lack a method ot accurately forecast whether and when they’ll actually occur, and how strong they might be.

Oregon State University’s Tuba Ozkan-Haller is hoping to change all that. For the last five years, she’s been working to develop a model to identify the location of rip currents up to a day in advance – something that would be a boon to swimmers, surfers and lifeguards around the world, and could save hundreds of lives a year.

Ozkan-Haller, an associate professor in OSU’s College of Earth, Ocean & Atmospheric Sciences, surveys the topography of the ocean floor to figure out how waves will travel over it; this allows her to see how that mass of water can escape back from shore via a rip current. She plugs these factors into a mathematical model she developed that predicts where and when rip currents will occur – and how strong they will be.

Helping her efforts are cutting-edge surveying technologies that allow her to observe properties at the water’s surface and infer the underlying bathymetry from those observations. This is a much more efficient and accurate way to get a sense of the sea floor than the standard procedure of surveying from a boat.

“I’m totally floored by how well we can do compared to traditional surveying methods,” says Ozkan-Haller. “You can set up a radar system near a beach and get continuous estimates of the bathymetry as it evolves from day to day without ever stepping foot into the water.”

The rip current effort is part of Ozkan-Haller’s broader interest in underwater coastal topography and how it helps shape the ocean’s waves. Oregon Sea Grant has supported some of that work, including a related project to develop a model for predicting nearshore wave patterns and heights. A reliable wave forecast system would benefit navigation, fishing, transportation, beach safety and even wave-energy siting.

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Survey: Climate Change a Concern but not a Priority to Oregon Coast Professionals

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Many public officials and community leaders on the Oregon coast believe their local climate is changing and the change will affect their communities. But, overall, addressing the changing climate is not among their most urgent concerns.

These are among the findings of a 2012 survey by Oregon Sea Grant at Oregon State University (OSU).

Sea Grant surveyed coastal professionals, elected officials and other local  leaders and found that approximately 60 percent of the 140 survey respondents believe the local climate is changing. By contrast, 18 percent think it is not, and 22 percent don’t know.

While most believe that their professional efforts toward addressing climate change would benefit the community, both elected officials and other coastal professionals also believe that a combination of governments and other organizations should be the ones to initiate local responses to the likely effects of climate change.

Overall, actions appear to be lagging behind beliefs and concerns, according to Oregon Sea Grant’s communication and the leader of the survey, Joseph Cone. “As of last May, many coastal professionals – about 44 percent of the survey respondents — were not currently involved in planning to adapt to its effects,” said Cone.

Cone will discuss the survey findings  on Wednesday, Feb. 20, in a brief talk to the OSU Climate Club “Conversations Across Disciplines” Lunch, in room 348 of Strand Agricultural Hall on the OSU campus. The lunches are open to the public; bring your own lunch. Coffee and cookies are provided.

The survey results placed climate change effects next to the bottom on a list of seven significant “potential stressors on your community during the next ten years.” Coastal professionals scored climate change effects considerably lower (46% of respondents moderately to extremely concerned) than the top-ranked stressors: a weak economy, and tsunami or earthquakes (approximately 70% moderately to extremely concerned for each).

The hurdles to planning most often noted by survey respondents were lack of agreement over the importance of climate change effects, and a lack of urgency regarding them. Where planning has begun, the survey showed it mainly in an early fact-finding stage.

Anticipating this, the survey asked coastal professionals to identify their specific climate change information needs; and they ranked a variety of environmental and social questions as “highly needed”:

  • Information about flooding or saltwater intrusion
  • Species and habitat vulnerability
  • Predictions of ecosystem impacts
  • Social and economic vulnerabilities
  • The cost of climate adaptation
  • How to communicate climate risks

The survey was administered online to 348 individuals, including some who had responded to a similar Oregon Sea Grant climate change study in 2008 which sampled Oregon coastal managers and practitioners. A report on the findings was prepared by OSU doctoral candidate Kirsten Winters

The Oregon survey was based in large part on a California coastal assessment conducted by California Sea Grant and its partners, and is part of a national Sea Grant study on coastal communities and climate change adaptation, led by Cone.

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Clever video aims to reduce rockfish deaths from barotrauma

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This clever video  uses a catchy rap tune, a wise-cracking puppet and some simple, practical instructions to engage fishermen in protecting rockfish from dying of barotrauma, by reaching them how to return their excess catch to the deeps – alive.

Barotrauma results when a rockfish is caught and hauled rapidly to the surface and its internal, air-filled swim bladder expands, often causing the animal’s eyes to bulge and even pushing its stomach out of its mouth. If thrown back in the water, the inflated bladder can cause the fish to float, making it easy prey for seabirds and other hungry animals.

But if the animal can be returned to the deeps quickly, water pressure will often reverse the expansion, allowing the  fish to survive. The video demonstrates a number of effective tools – home-made and commercial – for getting the fish back to the bottom quickly and with as little harm as possible.

The video, funded in part by California Sea Grant, was produced by a team including Alena Pribyl, a NOAA Southwest Fisheries Science Center researcher who earned her PhD. at Oregon State University while studying barotrauma.

Magnetic navigation may hold a key to salmon migration

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Salmon - photo by Jeffrey BasingerAfter years at sea, sockeye salmon returning to their freshwater homes may be guided by an early memory of the Earth’s magnetic field, encoded at the site where natal streams empty into the Pacific Ocean, according to a an Oregon Sea Grant-supported study published today in Current Biology.

Oregon State University’s Nathan Putnam and David Noakes, along with researchers from the University of North Carolina Chapel Hill, the University of Washington, and the University of California Davis, pored over 56 years of dta from federal fishery scientists who tracked the movements of salmon at the mouth of British Columbia’s Fraser River, where fish must choose to swim north around Vancouver Island, or around to the south. They matched that data with  measurements of the Earth’s geomagnetic field, which shifts predictably in strength and orientation over time and found that fish tended to choose the path where the field strength was more similar to that of the river mouth when they’d left, two years before.

Scientists hope the finding will help solve the mystery of how salmon find their way back to the rivers of their birth across thousands of miles of ocean. It’s already accepted that in the final stages of the journey to their breeding grounds, salmon use odors to guide them back to the stream or inlet where they hatched. But how the fish find their target river remains a mystery, although scientists have suspected for a while that magnetic cues play a role. Last summer, a team including UNC-Chapel Hill researcher Kenneth Lohmann – also part of this study – reported that rotating magnetite crystals in a fish nose responded to magnetic field orientation, providing a possible biological mechanism for magnetic field tracking.

The OSU researchers hope to further investigate the magnetic field correlation by subjecting captive fish to artificial magnetic fields and studying their behavior.

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