{"id":21,"date":"2012-10-26T20:51:08","date_gmt":"2012-10-26T20:51:08","guid":{"rendered":"http:\/\/blogs.oregonstate.edu\/joneslab\/?page_id=21"},"modified":"2017-05-14T12:45:57","modified_gmt":"2017-05-14T19:45:57","slug":"publications","status":"publish","type":"page","link":"https:\/\/blogs.oregonstate.edu\/joneslab\/publications\/","title":{"rendered":"Selected Publications"},"content":{"rendered":"<p><strong>See full publication list in <a href=\"http:\/\/scholar.google.com\/citations?hl=en&amp;view_op=list_works&amp;gmla=AJsN-F4de7M2MZx43N51QLKhZCK7pJ8HTNGDr3zScmcpxYKDF6tytIcz01ADe42IU58WUYC0Duno6rjrjHwtEzR7H5Kppri2aw&amp;user=aj4gWCcAAAAJ\">google scholar<\/a><\/strong><\/p>\n<p>Finch, K, E Espinoza, <strong>FA Jones<\/strong>, R Cronn. Navigating a random forest: Source identification of western Oregon Douglas-fir (<em>Pseudotsuga menziesii<\/em> (Mirb.) Franco) wood cores via Direct Analysis in Real Time (Time of Flight) Mass Spectrometry. 2017, <strong>Applications in Plant Sciences.<\/strong><\/p>\n<p><strong>\u00a0<\/strong>Swenson, NG and <strong>FA Jones<\/strong>. 2017 Community transcriptomics, genomics, and the problem of species co-occurrence. <strong>Journal of Ecology<\/strong>, 105: 563 \u2013 568.<\/p>\n<p>Schappe, T, F Albornoz, AS Neat, R Condit, BL Tuner, <strong>FA Jones<\/strong><sub>.<\/sub> 2017. The role of soil chemistry and plant neighborhoods in structuring fungal communities in three Panamanian rainforests. <strong>Journal of Ecology<\/strong>, 105: 569 \u2013 579.<\/p>\n<p>Celis, J, CB Halpern, and<strong> FA Jones<\/strong>. Intraspecific trait variation and the differential decline of meadow species during conifer encroachment. 2017. <strong>Journal of Plant Ecology.<\/strong><\/p>\n<p>Zalamea, P, BL Turner,K Winter, <strong>FA Jones<\/strong>, C Sarmiento and JW Dalling 2016. Seedling growth responses responses to phosphorus distribution patterns of tropical trees. <a href=\"http:\/\/onlinelibrary.wiley.com\/wol1\/doi\/10.1111\/nph.14045\/abstract\">New Phytologist<\/a><\/p>\n<p>Barber\u00e1n, A, KL McGuire, JA Wolf, <strong>FA Jones<\/strong>, SJ Wright, BL Turner, A Essene, SP Hubbell, B. Faircloth, N Fierer. 2015<em>.<\/em> Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest. <a href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/ele.12536\/abstract\"><strong>Ecology Letters<\/strong><\/a><\/p>\n<p>Erickson DL <strong>FA Jones<\/strong>, et al. 2014. Comparative evolutionary diversity and phylogenetic structure across multiple forest dynamics plots: a mega-phylogeny approach. <a href=\"http:\/\/journal.frontiersin.org\/Journal\/10.3389\/fgene.2014.00358\/abstract\">Frontiers in Genetics<\/a>. 5:00358.<\/p>\n<p>Pearse, WD, <b>FA Jones<\/b>, and A Purvis. 2013. Barro Colorado Island\u2019s phylogenetic assemblage structure across fine spatial scales and among clades of different ages.\u00a0 <a href=\"http:\/\/www.esajournals.org\/doi\/abs\/10.1890\/12-1676.1\">Ecology<\/a>. 94: 2861-2872.<b><br \/>\n<\/b><\/p>\n<p>McInnes, L, <b>FA Jones<\/b>, CDL Orme, B Sobkowiak, R Govaerts, TG Barraclough, MW Chase, N Hassan, DE Soltis, PS Soltis, and V Savolainen<sub>.<\/sub>. 2013. Do global diversity patterns of vertebrates reflect those of monocots?\u00a0 <a href=\"http:\/\/www.plosone.org\/article\/info%3Adoi%2F10.1371%2Fjournal.pone.0056979\">PLoS ONE<\/a> 8(5): e56979. doi:10.1371\/journal.pone.0056979<\/p>\n<p><strong>\u00a0Jones, FA<\/strong> I Ceron-Souza, BD Hardesty, and CW Dick. 2013.\u00a0 Genetic evidence of Quaternary demographic changes in four rainforest tree species sampled across the Isthmus of Panama.\u00a0 <a href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/jbi.12037\/full\">Journal of Biogeography<\/a>, 40: 720-731.<\/p>\n<p>Ivania Cer\u00f3n-Souza, Eldredge Bermingham, William Owen McMillan and<strong> FA Jones<\/strong> \u00a02012.\u00a0Comparative genetic structure of two mangrove species in Caribbean and Pacific estuaries of Panama.\u00a0<a href=\"http:\/\/www.biomedcentral.com\/1471-2148\/12\/205\/\">BMC Evolutionary Biology<\/a>, 12:205.\u00a0DOI: 10.1186\/1471-2148-12-205<\/p>\n<p><strong>Jones, FA<\/strong>, DL Erickson, MA Bernal, WJ Kress, EA Herre, H Muller-Landau, O Sanjur, E Bermingham, and BL Turner 2011. The roots of diversity: below ground species overlap in a tropical forest revealed by DNA barcoding and inverse modeling of root distributions.<a href=\"http:\/\/www.plosone.org\/article\/info%3Adoi%2F10.1371%2Fjournal.pone.0024506\">PLoS ONE<\/a>, 6, e24506.<\/p>\n<p><strong>Jones, FA<\/strong> 2010.\u00a0 Reconciling field observations of dispersal with estimates of gene flow.\u00a0 <a href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/j.1365-294X.2010.04778.x\/full\">Molecular Ecology<\/a>, 19, 4379-4382.<\/p>\n<p><strong>Jones, FA<\/strong> and LS Comita 2010.\u00a0 Density-dependent predispersal seed predation and fruit set in a tropical tree.\u00a0 <a href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/j.1600-0706.2010.18547.x\/full\">Oikos<\/a>, 119, 1841-1847.<\/p>\n<p>Kress, WJ, DL Erickson, <strong>FA Jones<\/strong>, N Swenson, R Perez, O Sanjur, and E Bermingham 2009.\u00a0 Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama.\u00a0 <a href=\"http:\/\/www.pnas.org\/content\/106\/44\/18621.short\">Proceedings of the National Academy of Sciences<\/a>, 106, 18627-18632.<\/p>\n<p><strong>Jones, FA<\/strong> and LS Comita 2008. Neighbourhood density and genetic relatedness interact to determine fruit set and abortion rates in a continuous tropical tree population. <a href=\"http:\/\/rspb.royalsocietypublishing.org\/content\/275\/1652\/2759.short\">Proceedings of the Royal Society of London Series B<\/a>, 275, 2759-2767.<\/p>\n<p>SJ Wright, A Trakhtenbrot, G Boher, M Detto, N Horvitz, GG Kabul, HC Muller-Landau, <strong>FA Jones<\/strong>, and R Nathan 2008.\u00a0 Understanding strategies for seed dispersal by wind under contrasting atmospheric conditions.\u00a0 <a href=\"http:\/\/www.pnas.org\/content\/105\/49\/19084.short\">Proceedings of the National Academy of Sciences<\/a> 105, 19084-19089.<\/p>\n<p><strong>Jones, FA<\/strong> and HC Muller-Landau 2008.\u00a0 Measuring long distance seed dispersal in complex natural environments: an evaluation and integration of classical and genetic methods.\u00a0 <a href=\"onlinelibrary.wiley.com\/doi\/10.1111\/j.1365-2745.2008.01400.x\/full\">Journal of Ecology<\/a> 96, 642-652.<\/p>\n<p>Dick, CW, OJ Hardy, <strong>FA Jones<\/strong>, and RJ Petit 2008.\u00a0 Spatial scales of pollen and seed-mediated gene dispersal in tropical forest trees.\u00a0 <a href=\"http:\/\/link.springer.com\/article\/10.1007\/s12042-007-9006-6#page-1\">Tropical Plant Biology<\/a>, 1, 20-33<\/p>\n<p><strong>Jones, FA<\/strong> and SP Hubbell 2006.\u00a0 Demographic spatial genetic structure of the neotropical tree, <em>Jacaranda copaia<\/em>.\u00a0 <a href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/j.1365-294X.2006.03023.x\/full\">Molecular Ecology<\/a>, 15, 3205-3217.<\/p>\n<p><strong>Jones, FA<\/strong>, JL Hamrick, CJ Peterson, and ER Squiers 2006.\u00a0 Inferring colonization history from analyses of spatial genetic structure within populations of <em>Pinus strobus<\/em> and <em>Quercus rubra<\/em>. <a href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/j.1365-294X.2005.02830.x\/full\">Molecular Ecology<\/a>, 15, 851-861.<\/p>\n<p><strong>Jones, FA<\/strong>, J Chen, G-J Weng, and SP Hubbell 2005.\u00a0 A genetic evaluation of seed dispersal in the Neotropical tree, <em>Jacaranda copaia<\/em> (Bignoniaceae).\u00a0 <a href=\"http:\/\/www.jstor.org\/stable\/10.1086\/491661\">The American Naturalist<\/a>, 166, 843-855<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>See full publication list in google scholar Finch, K, E Espinoza, FA Jones, R Cronn. Navigating a random forest: Source identification of western Oregon Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) wood cores via Direct Analysis in Real Time (Time of Flight) Mass Spectrometry. 2017, Applications in Plant Sciences. \u00a0Swenson, NG and FA Jones. 2017 Community transcriptomics, [&hellip;]<\/p>\n","protected":false},"author":142,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"open","ping_status":"open","template":"","meta":{"jetpack_post_was_ever_published":false,"footnotes":""},"class_list":["post-21","page","type-page","status-publish","hentry"],"jetpack_shortlink":"https:\/\/wp.me\/P3CtpG-l","jetpack_likes_enabled":true,"jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/pages\/21","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/users\/142"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/comments?post=21"}],"version-history":[{"count":24,"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/pages\/21\/revisions"}],"predecessor-version":[{"id":864,"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/pages\/21\/revisions\/864"}],"wp:attachment":[{"href":"https:\/\/blogs.oregonstate.edu\/joneslab\/wp-json\/wp\/v2\/media?parent=21"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}