foraging ecology – Page 7 – Geospatial Ecology of Marine Megafauna Laboratory

GEMM Lab 2017: A Year in the Life

By Dawn Barlow, MSc Student, Department of Fisheries and Wildlife

The days are growing shorter, and 2017 is drawing to a close. What a full year it has been for the GEMM Lab! Here is a recap, filled with photos, links to previous blogs, and personal highlights, best enjoyed over a cup of hot cocoa. Happy Holidays from all of us!

The New Zealand blue whale team in action aboard the R/V Star Keys. Photo by L. Torres.

Things started off with a bang in January as the New Zealand blue whale team headed to the other side of the world for another field season. Leigh, Todd and I joined forces with collaborators from Cornell University and the New Zealand Department of Conservation aboard the R/V Star Keys for the duration of the survey. What a fruitful season it was! We recorded sightings of 68 blue whales, collected biopsy and fecal samples, as well as prey and oceanographic data. The highlight came on our very last day when we were able to capture a blue whale surface lunge feeding on krill from an aerial perspective via the drone. This footage received considerable attention around the world, and now has over 3 million views!

A blue whale surfaces just off the bow of R/V Star Keys. Photo by D. Barlow.

In the spring Rachael made her way to the remote Pribilof Islands of Alaska to study the foraging ecology of red-legged kittiwakes. Her objectives included comparing the birds that reproduce successfully and those that don’t, however she was thrown a major curveball: none of the birds in the colony were able to successfully reproduce. In fact, they didn’t even build nests. Further analyses may elucidate some of the reasons for the reproductive failure of this sentinel species of the Bering Sea… stay tuned.

The 2017 Port Orford field team. Photo by A. Kownacki.

Florence is a newly-minted MSc! In June, Florence successfully defended her Masters research on gray whale foraging and the impacts of vessel disturbance. She gracefully answered questions from the room packed with people, and we all couldn’t have been prouder to say “that’s my labmate!” during the post-defense celebrations. But she couldn’t leave us just yet! Florence stayed on for another season of field work on the gray whale foraging ecology project in Port Orford, this time mentoring local high school students as part of the project. Florence’s M.Sc. defense!

Upon the gray whales’ return to the Oregon Coast for the summer, Leila, Leigh, and Todd launched right back into the stress physiology and noise project. This year, the work included prey sampling and fixed hydrophones that recorded the soundscape throughout the season. The use of drones continues to offer a unique perspective and insight into whale behavior.

Video captured under NOAA/NMFS permit #16111.

Solene with a humpback whale biopsy sample. Photo by N. Job.

Solene spent the austral winter looking for humpback whales in the Coral Sea, as she participated in several research cruises to remote seamounts and reefs around New Caledonia. This field season was full of new experiences (using moored hydrophones on Antigonia seamount, recording dive depths with SPLASH10 satellite tags) and surprises. For the first time, whales were tracked all the way from New Caledonia to the east coast of Australian. As her PhD draws to a close in the coming year, she will seek to understand the movement patterns and habitat preferences of humpback whales in the region.

A humpback whale observed during the 2017 coral sea research cruise. Photo by S. Derville.

This summer we were joined by two new lab members! Dom Kone will be studying the potential reintroduction of sea otters to the Oregon Coast as a MSc student in the Marine Resource Management program, and Alexa Kownacki will be studying population health of bottlenose dolphins in California as a PhD student in the Department of Fisheries and Wildlife. We are thrilled to have them on the GEMM Lab team, and look forward to seeing their projects develop. Speaking of new projects from this year, Leigh and Rachael have launched into some exciting research on interactions between albatrosses and fishing vessels in the North Pacific, funded by the NOAA Bycatch Reduction Engineering Program.

During the austral wintertime when most of us were all in Oregon, the New Zealand blue whale project received more and more political and media attention. Leigh was called to testify in court as part of a contentious permit application case for a seabed mine in the South Taranaki Bight. As austral winter turned to austral spring, a shift in the New Zealand government led to an initiative to designate a marine mammal sanctuary in the South Taranaki Bight, and awareness has risen about the potential impacts of seismic exploration for oil and gas reserves. These tangible applications of our research to management decisions is very gratifying and empowers us to continue our efforts.

In the fall, many of us traveled to Halifax, Nova Scotia to present our latest and greatest findings at the 22^nd Biennial Conference on the Biology of Marine Mammals. The strength of the lab shone through at the meeting during each presentation, and we all beamed with pride when we said our affiliation was with the GEMM Lab at OSU. In other conference news, Rachael was awarded the runner-up for her presentation at the World Seabird Twitter Conference!

GEMM Lab members present their research. From left to right, top to bottom: Amanda Holdman, Leila Lemos, Solène Derville, Dawn Barlow, Sharon Nieukirk, and Florence Sullivan.

Leigh had a big year in many ways. Along with numerous scientific accomplishments—new publications, new students, successful fieldwork, successful defenses—she had a tremendous personal accomplishment as well. In the spring she was diagnosed with breast cancer, and after a hard fight she was pronounced cancer-free this November. We are all astounded with how gracefully and fearlessly she navigated these times. Look out world, this lab’s Principle Investigator can accomplish anything!

This austral summer we will not be making our way south to join the blue whales. However, we are keenly watching from afar as a seismic survey utilizing the largest seismic survey vessel in the world has launched in the South Taranaki Bight. This survey has been met with considerable resistance, culminating in a rally led by Greenpeace that featured a giant inflatable blue whale in front of Parliament in Wellington. We are eagerly planning our return to continue this study, but that will hopefully be the subject of a future blog.

New publications for the GEMM Lab in 2017 include six for Leigh, three for Rachael, and two for Alexa. Highlights include Classification of Animal Movement Behavior through Residence in Space and Time and A sense of scale: Foraging cetaceans’ use of scale-dependent multimodal sensory systems. Next year is bound to be a big one for GEMM Lab publications, as Amanda, Florence, Solene, Leila, Leigh, and I all have multiple papers currently in review or revision, and more in the works from all of us. How exciting!

In our final lab meeting of the year, we went around the table to share what we’ve learned this year. The responses ranged from really grasping the mechanisms of upwelling in the California Current to gaining proficiency in coding and computing, to the importance of having a supportive community in graduate school to trust that the right thing will happen. If you are reading this, thank you for your interest in our work. We are looking forward to a successful 2018. Happy holidays from the GEMM Lab!

GEMM Lab members, friends, and families gather for a holiday celebration.

Skype a Scientist – Are you smarter than a middle schooler?

By Florence Sullivan, MSc

What do baby whales eat?

Does the mom whale take care of the baby whale alone?

How do whales communicate?

What are their behaviors?

These are the questions 4^th grade students half a world away asked me. They are studying biodiversity and were very curious to meet a real life scientist. It was 2:00pm on a Tuesday here in Newport, OR, while in Australia, this classroom full of students was sitting in their 9:00am Wednesday science class. We had an hour-long conversation about gray whale behaviors, habitat, life cycle, and general biology – all thanks to the wonders of science, technology and the computer program, Skype. The next day, I did it all again, and Skyped in to a classroom in British Columbia, to field questions about gray whales, right whales and science careers from a group of enthusiastic 5^th and 6^th grade students.

A class of Australian 4th graders had many imaginative questions for me through the Skype a Scientist Program.

But how in the world did I end up answering questions over Skype for a classroom full of kids in the first place? Like many good things, it began with a conversation. During the 2016 USA election cycle, it became apparent that many people in this country distrust scientists. Sarah McAnulty, a PhD student at the University of Connecticut who studies the immune system of bob tail squid, had already been engaging in informal science communication through a profile on tumblr. But posting things on tumblr is like preaching to the choir – your audience tends to be people who are already interested in your subject. If the problem is trying to change the public perception of scientists from aloof and insular to trustworthy and approachable, you need to start by finding people who have a lot of questions, and few pre-existing prejudices. Who fits the bill perfectly? Kids!

After conversations with colleagues, she came up with the idea of using Skype to reach classrooms of students outside of the range where scientists usually congregate (large cities and universities). Sarah started by connecting a handful of UConn colleagues with K-12 teachers through Facebook, but the idea quickly gained steam through mentions at a scientific conference, posts on the ‘March for Science’ Facebook group, media coverage, and word-of-mouth sharing between colleagues on both the teaching and the research side of the story. Now, there is a full-fledged website (https://www.skypeascientist.com/) where teachers and scientists can sign up to be matched based on availability, topic, and sometimes, demographic. When pairing classrooms and scientists, Sarah makes an effort for minority students (whether this means race, gender, disability, language, or other) to see themselves represented in the scientists they get to talk to, if possible. Representation matters –we are beyond the age of old white men in lab coats being the only ‘real scientists’ represented in media, but unfortunately, the stereotype is not dead yet! In less than a year, the program has grown to over 1900 scientists, with new fields of expertise being added frequently as people spread the word and get interested. The program has been, and promises to continue being, an excellent resource for teachers who want to show the relevance of the subjects being discussed in their classrooms. As evidenced by the fact that I spoke with a classroom in Australia, this is a global program – check out the maps below to see where students and scientists are coming from!

This map shows the locations of all participating classrooms, current on Oct 12, 2017.

This map shows the locations of all participating scientists, current on October 22, 2017.

As for myself, I got involved because my lab mate, Alexa, mentioned how much fun she had Skyping with students. The sign-up process was incredibly easy, and when I got matched with two classrooms, the organizers even provided a nice mad-libs style ‘fill in the blank’ introduction letter so that I didn’t waste time agonizing over how to introduce myself.

Introductory Mad-libs for scientists. Courtesy of the Skype a Scientist program.

I sent the classrooms the youtube video of my field work, and a couple of these blog posts, and waited to hear back. I was very impressed with the 5^th/6^th grade class from British Columbia because the teacher actually let the students take the lead from the get-go. One of the students replied to my email, told me what they were studying, and started the process of scheduling a meeting time that would work for both of us. When I called in, two other students took the reins, and acted as spokespeople for the rest of their classmates by repeating questions from the back of the room so that I could hear everything clearly. It was so fun to see and hear the enthusiasm of the students as they asked their questions. Their deep curiosity and obvious excitement about the subject matter was contagious, and I found my own tone, body language, and attitude shifting to match theirs as I helped them discover the building blocks of marine ecology that I have long accepted as normal. This two way street of learning is a good reminder that we all start somewhere.

If you are interested in the program at all, I encourage you to sign up at this link: (https://www.skypeascientist.com/). Who knows, engaging with kids like this just might remind you of the innocent curiosity of childhood that brought you to your scientific career in the first place.

Here are some of my favorite question that I was asked, and the responses I gave:

How do gray whales communicate?

With songs and underwater sounds! Check out this great website for some great examples, and prepare to be amazed! (I played the Conga and the belch-like call during the skype session, much to the amusement of the students) https://www.sanignaciograywhales.org/project/acoustics/

What do baby whales eat?

Whales are mammals just like us, so believe it or not, baby whales drink their mother’s milk!

How long have you been a marine special ecologist for?

My favorite bit here was the mis-spelling, which made me a ‘special’ ecologist instead of a ‘spatial’ ecologist. So I talked about how spatial ecology is a special type of ecology where we look at how big things move in the ocean!

My question is, can a grey whale bite people if people come close to them?
This was a chance to show off our lab baleen samples! I also took the time to look this up, and it turns out that bite is defined as “using teeth to cut into something” and a gray whale doesn’t have teeth! Instead, they have baleen, which they use to sieve stuff out of the water. So I don’t think you need to worry about getting bitten by a gray whale. That being said, it’s important not to get close to them, because they are so much bigger than us that they could hurt us on accident.

When you go out to see the whales, why don’t you use slightly bigger boats so you don’t flip over if the whale gets too close to you, or when you get to close to the whale?
Our research kayak is a never-ending delight. It’s less expensive than a bigger boat, and doesn’t use fossil fuels. We want to be quiet in the water and not disturb the whale, and actively avoid getting within 100 yards so there shouldn’t be any danger. Sometimes the whales surprise us though, and we have to be careful. In this case, everyone has safety training and is able to rescue themselves if the boat should flip.

(This led to an entertaining discussion of field safety, and the appalling idea that I would make my interns jump out of the kayak into cold Pacific water on purpose during safety training)

There were many more questions, but why don’t you give the program a try, and see what kind of questions you get to answer?!

Meeting to disentangle factors influencing albatross bycatch in the deep-set Hawaii Longline Fishery

By Rachael Orben PhD., Research Associate in the Seabird Oceanography Lab and GEMM Lab

Seabird bycatch is a global problem (e.g. Anderson et al 2011). Humans like eating fish and seabirds do too. Fishing vessels provide a food source for seabirds through discards, bait, and target fish. Different types of fishing gear pose different risks for seabirds. The good news is there are things that we can do to decrease these risks.

Albatrosses and petrels are particularly vulnerable to being hooked by longlines as the baited hooks are set overboard. Albatrosses and petrels are long lived (e.g., Wisdom the 65-year-old Laysan Albatross) and have a limited number of off-spring. Therefore fishery mortalities can have devastating impacts on populations if left unchecked. Currently all 22 species of albatrosses have IUCN statuses ranging from Near Threatened to Critically Endangered.

North Pacific Albatrosses

Longlines are used to catch a number of target species including tuna, swordfish, halibut, black cod, and toothfish. Just like the diversity of species this type of fishing gear is used to catch, there are a number of ways to set long-lines and ways to mitigate seabird bycatch and a method that works well in one instance may not work so well in other places. Tori Lines (a.k.a. streamer lines), side setting, night setting, faster sinking lines, and discard regulations are a few of the methods used.

Tori lines work by scaring birds away from baited longline hooks while they sink. Once the hooks sink past a few meters albatrosses are not able to reach them. Photo by Ed Melvin/Washington Sea Grant

In early November, I had the opportunity to attend a workshop in Honolulu, Hawaii hosted by the Western Pacific Regional Fishery Management Council. The workshop was held due to a dramatic increase in black-footed albatross bycatch by the Hawaii deep-set longline fishery in 2015 and 2016 (see the figure below). It was our job to figure out why, or more realistically pave the path for future analysis and data collection to answer this question.

Recently Leigh Torres and I were funded by the NOAA Bycatch Reduction Engineering Program to characterize fine-scale fishery-albatross interactions using previously collected albatross tracking data and tracks of fishing boats processed in real time by Global Fishing Watch. The workshop provided the perfect opportunity for me to learn more about the Hawaii longline fisheries.

Reasons for Albatross Bycatch

Rates of bycatch can change due to many factors, including where or when the fish are being caught, subtle choices made by fishermen, changes in seabird distributions, changes in prey of fish or seabirds, and so on. So, it can be very challenging to pin-point the exact reasons for an increase in bycatch. But, across the North Pacific, 2015 and 2016, were very strange years oceanographically. There was the warm water phenomena known as ‘the Blob’ along with a strong El Niño, and a positive Pacific Decadal Oscillation (PDO). So perhaps, bycatch levels will drop off again as we move into a La Niña, but perhaps not. It is good to know that fishery managers and scientists are paying attention.

Implications

From the perspective of the fisherman in the Hawaiian longline fleet, albatrosses are hardly ever caught; they are pulled in at a barely perceptible level of less than one bird per set and only from about December to July. Although one occasional dead bird among the menagerie of fish doesn’t seem like much, it can add up: there are ~140 boats in the deep-set longline fleet, that set 40-52 million hooks a year, plus the multiple other fisheries and fleets encountered by albatrosses across the North Pacific, and enough albatrosses could be killed to make a difference in their population numbers. And, we need to also consider the cumulative impacts since fisheries aren’t the only threat (e.g., sea level rise, storm surges, introduced predators; see Bakker et al 2018).

Inspecting the Catch

On the morning of the last day of the workshop we took a field trip to the Honolulu Fish Market at Pier 38 in Honolulu where the Hawaiian long-line fishing vessels dock to offload and sell their catch. We checked out some of the boats, watched fish being craned off a vessel into a large cart and went inside the cooler room to see where the fish are auctioned.

In the cooler room, the catch from one vessel was laid out on brilliant blue pallets. The tails of each tuna were sliced so the deep pink color of the meat could be assessed. A core sample of each fish was laid out on an identification tag. Then the auctioneer and the buyers visited each fish, rapidly bidding on a price per pound. Their quick words were basically incomprehensible to my untrained ear.

The prize-catch of the fishery, and the fish that gets the highest price per pound, is the big eye tuna. A number of other large and beautiful pelagic species are also caught and sold including: long and narrow marlins, with their bills cut off for packing, side table size pomfrets, speckled white with red accents; and the distinctive blunt headed mahimahi, with yellow bellies. Once the fish are sold, they are moved out of the auction room, packed and loaded into the trucks that whisk them away toward markets and restaurants in Hawaii, the U.S. Mainland, and beyond.

Sustainable management of these commercially valuable fish is dependent on a better understanding of their pelagic ecosystem, including when, where, and why albatrosses interact with fishing vessels. Hopefully, our current research project will help to answer some of these questions.

A Marine Mammal Odyssey, Eh!

By Leila Lemos, PhD student

Dawn Barlow, MS student

Florence Sullivan, MS

The Society for Marine Mammalogy’s Biennial Conference on the Biology of Marine Mammals happens every two years and this year the conference took place in Halifax, Nova Scotia, Canada.

Logo of the Society for Marine Mammalogy’s 22nd Biennial Conference on the Biology of Marine Mammals, 2017: A Marine Mammal Odyssey, eh!

The conference started with a welcome reception on Sunday, October 22^nd, followed by a week of plenaries, oral presentations, speed talks and posters, and two more days with different workshops to attend.

This conference is an important event for us, as marine mammalogists. This is the moment where we get to share our projects (how exciting!), get important feedback, and hear about different studies that are being conducted around the world. It is also an opportunity to network and find opportunities for collaboration with other researchers, and of course to learn from our colleagues who are presenting their work.

The GEMM Lab attending the opening plenaries of the conference!

The first day of conference started with an excellent talk from Asha de Vos, from Sri Lanka, where she discussed the need for increased diversity (in all aspects including race, gender, nationality, etc.) in our field, and advocated for the end of “parachute scientists” who come into a foreign (to them) location, complete their research, and then leave without communicating results, or empowering the local community to care or act in response to local conservation issues. She also talked about the difficulty that researchers in developing countries face accessing research that is hidden behind journal pay walls, and encouraged everyone to get creative with communication! This means using blogs and social media, talking to science communicators and others in order to get our stories out, and no longer hiding our results behind the ivory tower of academia. Overall, it was an inspirational way to begin the week.

On Thursday morning we heard Julie van der Hoop, who was this year’s recipient of the F.G. Wood Memorial Scholarship Award, present her work on “Drag from fishing gear entangling right whales: a major extinction risk factor”. Julie observed a decrease in lipid reserves in entangled whales and questioned if entanglements are as costly as events such as migration, pregnancy or lactation. Tags were also deployed on whales that had been disentangled from fishing gear, and researchers were able to see an increase in whale speed and dive depth.

Julie van der Hoop talks about different drag forces of fishing gears
on North Atlantic Right Whales.

There were many other interesting talks over the course of the week. Some of the talks that inspired us were:

— Stephen Trumble’s talk “Earplugs reveal a century of stress in baleen whales and the impact of industrial whaling” presented a time-series of cortisol profiles of different species of baleen whales using earplugs. The temporal data was compared to whaling data information and they were able to see a high correlation between datasets. However, during a low whaling season concurrent to the World War II in the 40’s, high cortisol levels were potentially associated to an increase in noise from ship traffic.

— Jane Khudyakov (“Elephant seal blubber transcriptome and proteome responses to single and repeated stress”) and Cory Champagne (“Metabolomic response to acute and repeated stress in the northern elephant seal”) presented different aspects of the same project. Jane looked at down/upregulation of genes (downregulation is when a cell decreases the quantity of a cellular component, such as RNA or protein, in response to an external stimulus; upregulation is the opposite: when the cell increases the quantity of cellular components) to check for stress. She was able to confirm an upregulation of genes after repeated stressor exposure. Cory checked for influences on the metabolism after administering ACTH (adrenocorticotropic hormone: a stimulating hormone that causes the release of glucocorticoid hormones by the adrenal cortex. i.e., cortisol, a stress related hormone) to elephant seals. By looking only at the stress-related hormone, he was not able to differentiate acute from chronic stress responses. However, he showed that many other metabolic processes varied according to the stress-exposure time. This included a decrease in amino acids, mobilization of lipids and upregulation of carbohydrates.

— Jouni Koskela (“Fishing restrictions is an essential protection method of the Saimaa ringed seal”) talked about the various conservation efforts being undertaken for the endangered Lake Saimaa ringed seal. Gill nets account for 90% of seal pup mortality, but if new pups can reach 20kg, only 14% of them will drown in these fishing net entanglements. Working with local industry and recreational interests, increased fishing restrictions have been enacted during the weaning season. In addition to other year-round restrictions, this has led to a small, but noticeable upward trend in pup production and population growth! A conservation success story is always gratifying to hear, and we wish these collaborative efforts continued future success.

— Charmain Hamilton (“Impacts of sea-ice declines on a pinnacle Arctic predator-prey relationship: Habitat, behaviour, and spatial overlap between coastal polar bears and ringed seals”) gave a fascinating presentation looking at how changing ice regimes in the arctic are affecting spatial habitat use patterns of polar bears. As ice decreases in the summer months, the polar bears move more, resulting in less spatial overlap with ringed seal habitat, and so the bears have turned to targeting ground nesting seabirds. This spatio-temporal mismatch of traditional predator/prey has drastic implications for arctic food web dynamics.

— Nicholas Farmer’s presentation on a Population Consequences of Disturbance (PCoD) model for assessing theoretical impacts of seismic survey on sperm whale population health had some interesting parallels with new questions in our New Zealand blue whale project. By simulating whale movement through modeled three-dimensional sound fields, he found that the frequency of the disturbance (i.e., how many days in a row the seismic survey activity persisted) was very important in determining effects on the whales. If the seismic noise persists for many days in a row, the sperm whales may not be able to replenish their caloric reserves because of ongoing disturbance. As you can imagine, this pattern gets worse with more sequential days of disturbance.

— Jeremy Goldbogen used suction cup tags equipped with video cameras to peer into an unusual ecological niche: the boundary layer of large whales, where drag is minimized and remoras and small invertebrates compete and thrive. Who would have thought that at a marine mammal conference, a room full of people would be smiling and laughing at remoras sliding around the back of a blue whale, or barnacles filter feeding as they go for a ride with a humpback whale? Insights from animals that occupy this rare niche can inform improvements to current tag technologies.

The GEMM Lab was well represented this year with six different talks: four oral presentations and two speed talks! It is evident that all of our hard work and preparation, such as practicing our talks in front of our lab mates two weeks in advance, paid off. All of the talks were extremely well received by the audience, and a few generated intelligent questions and discussion afterwards – exactly as we hoped. It was certainly gratifying to see how packed the room was for Sharon’s announcement of our new method of standardizing photogrammetry from drones, and how long the people stayed to talk to Dawn after her presentation about an unique population of New Zealand blue whales – it took us over an hour to be able to take her away for food and the celebratory drinks she deserved!

GEMM Lab members on their talks. From left to right, top to bottom: Amanda Holdman, Leila Lemos, Solène Derville, Dawn Barlow, Sharon Nieukirk, and Florence Sullivan.

GEMM Lab members at the closing celebration. From left to right: Florence Sullivan, Leila Lemos, Amanda Holdman, Solène Derville, and Dawn Barlow.

We are not always serious, we can get silly sometimes!

The weekend after the conference many courageous researchers who wanted to stuff their brains with even more specialized knowledge participated in different targeted workshops. From 32 different workshops that were offered, Leila chose to participate in “Measuring hormones in marine mammals: Current methods, alternative sample matrices, and future directions” in order to learn more about the new methods, hormones and matrices that are being used by different research groups and also to make connections with other endocrinologist researchers. Solène participated in the workshop “Reproducible Research with R, Git, and GitHub” led by Robert Shick. She learned how to better organize her research workflow and looks forward to teaching us all how to be better collaborative coders, and ensure our analysis is reproducible by others and by our future selves!

On Sunday none of us from the GEMM Lab participated in workshops and we were able to explore a little bit of the Bay of Fundy, an important area for many marine mammal species. Even though we didn’t spot any marine mammals, we enjoyed witnessing the enormous tidal exchange of the bay (the largest tides in the world), and the fall colors of the Annaoplis valley were stunning as well. Our little trip was fun and relaxing after a whole week of learning.

GEMM Lab at the Bay of Fundy; from left to right: Kelly Sullivan (Florence’s husband and a GEMM Lab fan), Florence Sullivan, Dawn Barlow, Solène Derville, and Leila Lemos.

It is amazing how refreshing it is to participate in a conference. So many ideas popping up in our heads and an increasing desire to continue doing research and work for conservation of marine mammals. Now it’s time to put all of our ideas and energy into practice back home! See you all in two years at the next conference in Barcelona!

The GEMM Lab is Conference-Bound!

By Dawn Barlow, MSc Student, Department of Fisheries and Wildlife, Geospatial Ecology of Marine Megafauna Lab

Every two years, an international community of scientists gather for one week to discuss the most current and pressing science and conservation issues surrounding marine mammals. The thousands of attendees range from longtime researchers who have truly shaped the field throughout the course of their careers to students who are just beginning to carve out a niche of their own. I was able to attend the last conference, which took place in San Francisco in 2015, as an undergraduate. The experience cemented my desire to pursue marine mammal research in graduate school and beyond, and also solidified my connection with Leigh Torres and the Geospatial Ecology of Marine Megafauna Laboratory, leading to my current enrollment at Oregon State University. This year, the 22^nd Biennial Conference on the Biology of Marine Mammals takes place in Halifax, Nova Scotia, Canada. At the end of this week, Florence, Leila, Amanda, Solene, Sharon and I will head northeast to represent the GEMM Lab at the meeting!

As those of you reading this may not be able to attend, I’d like to share an overview of what we will be presenting next week. If you will be in Halifax, we warmly invite you to the following presentations. In order of appearance:

Amanda will present the final results from part of her MSc thesis on Monday in a presentation titled Comparative fine-scale harbor porpoise habitat models developed using remotely sensed and in situ data. It will be great for current GEMM Lab members to catch up with this recent GEMM Lab graduate on the other side of the continent! (Session: Conservation; Time: 4:00 pm)

On Tuesday morning, Leila will share the latest and greatest updates on her research about Oregon gray whales, including photogrammetry from drone images and stress hormones extracted from fecal samples! Her presentation is titled Combining traditional and novel techniques to link body condition and hormone variability in gray whales. This is innovative and cutting-edge work, and it is exciting to think it will be shared with the international research community. (Session: Health; Time: 10:45 am)

Did you think humpback whales have been so well studied that we must know just about everything about them? Think again! Solene will be sharing new and exciting insights from humpback whales tagged in New Caledonia, who appear to spend an intriguing amount of time around seamounts. Her talk Why do humpback whales aggregate around seamounts in South Pacific tropical waters? New insights from diving behaviour and ocean circulation analyses, will take place on Tuesday afternoon. (Session: Habitat and Distribution Speed Talks; Time: 1:30 pm)

I will be presenting the latest findings from our New Zealand blue whale research. Based on multiple data streams, we now have evidence for a unique blue whale population which is present year-round in New Zealand waters! This presentation, titled From migrant to resident: Multiple data streams point toward a resident New Zealand population of blue whales, will round out the oral presentations on Tuesday afternoon. (Session: Population Biology and Abundance; Time: 4:45 pm)

The GEMM Lab is using new technologies and innovative quantitative approaches to measure gray whale body condition and behaviors from an aerial perspective. On Wednesday afternoon, Sharon will present Drone up! Quantifying whale behavior and body condition from a new perspective on behalf of Leigh. With the emerging prevalence of drones, we are excited to introduce these quantitative applications. (Session: New Technology; Time: 11:45 am)

GoPros, kayaks, and gray whales, oh my! A limited budget couldn’t stop Florence from conducting excellent science and gaining new insights into gray whale fine-scale foraging. On Thursday afternoon, she will present Go-Pros, kayaks and gray whales: Linking fine-scale whale behavior with prey distributions on a shoestring budget, and share her findings, which she was able to pull off with minimal funds, creative study design, and a positive attitude. (Session: Foraging Ecology Speed Talks; Time: 1:55 pm)

Additional Oregon State University students presenting at the conference will include Michelle Fournet, Samara Haver, Niki Diogou, and Angie Sremba. We are thrilled to have such good representation at a meeting of this caliber! As you may know, we are all working on building the GEMM Lab’s social media presence and becoming more “twitterific”. So during the conference, please be sure to follow @GEMMLabOSU on twitter for live updates. Stay tuned!

New steps towards community engagement: introducing high schoolers to the field

By Florence Sullivan, MSc, GEMM Lab Research Assistant

This summer, I had the pleasure of returning to Port Orford to lead another field season of the GEMM Lab’s gray whale foraging ecology research project. While our goal this summer was to continue gathering data on gray whale habitat use and zooplankton community structure in the Port Orford region, we added in a new and exciting community engagement component: We integrated local high school students into our research efforts in order to engage with the local community to promote interest in the OSU field station and the research taking place in their community. Frequent blog readers will have seen the posts written by this year’s interns (Maggie O’Rourke Liggett, Nathan Malamud, and Quince Nye) as they described how they became interns, their experience doing fieldwork, and some lessons they’ve learned from the project. I am very impressed with the hard work and effort that all three of them put into making this field season a success. (Getting out of a warm bed, and showing up at the field station at 6am sharp for five weeks straight is no easy feat for high-schoolers or an undergrad student during summer break!)

Quince hard at work scanning the horizon for whale spouts. photo credit: Alexa Kownacki

During the month of August, our team collected the following data on whale distribution and behavior:

Spent 108 hours on the cliff looking for whales
Spent 11 hours actively tracking whales with the theodolite
Collected 19 whale tracklines
Identified 15 individual whales using photo-ID – Two of those whales came back 3 times each, and one of them was a whale nick-named “Buttons” who we had tracked in 2016 as well.

We also collected data on zooplankton – gray whale prey – in the area:

Collected 134 GoPro videos of the water column at the 12 kayak sample sites
Did approximately 147 zooplankton net tows
Collected 64 samples for community analysis to see what species of zooplankton were present
Collected 115 samples for energetic analysis to determine how many calories can be derived from each zooplankton

The 2017 field team. From left to right: Tom Calvanese (Field Station Manager), Florence Sullivan (Project Lead), Quince Nye, Maggie O’Rourke-Liggett, and Nathan Malamud. Photo credit: Alexa Kownacki

Since I began this project in 2015, I have been privileged to work with some truly fantastic interns. Each year, I learned new lessons about how to be an effective mentor, and how to communicate our research goals and project needs more clearly. This year was no exception, and I worked hard to bring some of the things I’ve learned into my project planning. As the team can tell you, science communication, and the benefits of building good will and strong community relationships were heavily emphasized over the course of the internship. Everyone was encouraged to use every opportunity to engage with the public, explain our work, and pass on new things they had learned. Whenever the team encountered other kayakers out on the water, we took the time to share any cool zooplankton samples we gathered that day, and explain the goals of our research. Maggie and I also took the opportunity to give a pair of evening lectures at Humbug Mountain State Park, which were both well attended by curious campers.

Florence and Maggie give evening lectures at Humbug Mountain State Park

In addition, the team held a successful final community presentation on September 1 at the Port Orford Field Station that 45 people attended! In the week leading up to the presentation, Quince and Nathan spent many long hours working diligently on the powerpoint presentation, while Maggie put together a video presentation of “the intern experience” (Click here for the video showcased on last week’s blog). I am incredibly proud of Nathan and Quince, and the clear and confident manner in which they presented their experience to the audience who showed up to support them. They easily fielded the following questions:

Q: “How do you tell the difference between a whale that is searching or foraging?”

A: When we look at the boundaries of our study site, a foraging whale consistently comes up to breathe in the same spot, while a searching whale covers a lot of distance going back and forth without leaving the general area.

Q: “How do we make sure that this program continues?”

A: Stay curious and support your students as they take on internships, support the field station as it seeks to provide resources, and if possible, donate to funds that raise money for research efforts.

Nathan talks about the plankton results during the final community presentation. photo credit: Alexa Kownacki

The audience during the final community presntation. photo credit: Alexa Kownacki

Quince and Nathan answer questions at the end of the community presentation. photo credit: Alexa Kownacki

When communicating science, it is important to results into context. In addition to showcasing the possibilities of excellent research with positive community support, and just how much a trio of young people can grow over the course of 6 weeks, this summer has highlighted the value of long term monitoring studies, particularly when studying long-lived animals such as whales. We saw far fewer whales this summer than compared to the two previous years, and the whales spent much less time in the Port Orford area (Table 1). As a scientist, knowing where whales are not (absence data) is just as important as knowing where whales are (presence data), and these marked differences drive our hypotheses! What has changed in the system? What can explain the differences in whale behavior between years? Does it have to do with food quality or availability? (This is why we have been gathering all those zooplankton samples.) Does it have to do with other oceanographic factors or human activities?

Table 1. Summary of whale tracking efforts for the three seasons of field work in Port Orford. Notice how in 2017 we only collected 194 whale location points (theodolite marks). This is about 92% less than in the previous years.

	2015	2016	2017
Hours spent watching	72:49	148:30	108
Hours spent tracking	80:39*	82:30	11
Number of individuals	43	50	15
Number of theodolite marks	2483	2414	194

*we often tracked more than one individual simultaneously in 2015

Long term monitoring projects give us a chance to notice differences between years, and ask questions about what are normal fluctuations in the system, and what are abnormal. On top of that, projects like this create the opportunity for additional internships, and to mentor more students in the scientific method of investigation. There is so much still to be explored in the Port Orford ecosystem, and I truly hope this program is able to continue. If you are interested in making a monetary contribution to sustain this research and internship program, donations can be accepted here (gemm lab fund) and here (field station fund).

Quince records zooplankon sample weights in the wet lab.

Quince sorts through a zooplankton sample in the wet lab.

Nathan stores zooplankton community analysis samples

Maggie, Florence and Quince enjoy the eclipse!

Quince and Maggie bundle up on the cliff as they watch for whales.

Nathan and Quince organize data on the computer at the end of the day.

Quince and Nathan build sand castles as we wait for the fog to clear before launching the research kayak

This research and student internships would not have been possible without the generous support from Oregon Sea Grant, the Oregon Coast STEM hub, the Port Orford Field Station, South Coast Tours, partnerships with the Bernard and Chapman labs, the OSU Marine Mammal Institute, and the Geospatial Ecology of Marine Megafauna Lab.

Through the intern’s eyes; a video log of the 2017 gray whale foraging ecology project.

By: Maggie O’Rourke-Liggett, GEMM lab summer intern, Oregon State University

Enjoy this short video showcasing the intern experience from the gray whale foraging ecology project this summer. Check back next week for a recap of our preliminary results.

The passion of a researcher

By Quince Nye, GEMM Lab Summer Intern, Pacific High School Junior

I have spent a lot of my life surrounded by nature. I like to backpack, bike, dive, and kayak in these natural environments. I also have the luck of having parents who are always planning to take me on another adventure where I get to see nature and its inhabitants in ways most people don’t get to enjoy.

Through my backyard explorations, I have begun to realize that Port Orford has an amazing ecosystem in the coves and rivers that are very tied into our community. I’ve fished and swam in these rivers, gone on kayaking tours in these coves (with a great kayak company called South Coast Tours that we partner with), and I’ve seen the life that dwells in them.

Nathan and Maggie paddle out to Mill Rocks for early morning sample collection

Growing up in a school of less than 100 kids I have learned to never reject an opportunity to be a part of something bigger and learn from that experience. So when one of my close friends told me about an OSU project (a college I’m interested in attending) that needed interns to help collect data on gray whales, and kayak almost every day, I signed up without a doubt in my mind.

The team gets some good practice tracking Buttons (Whale #3). Left to right; Quince, Nathan, Maggie, Florence.

Fast forward a month, and I wake up at 5:20 am. I eat breakfast and get to the Port Orford Field Station. We make a plan for the operations of both the kayak team and cliff team. Today, I’m part of the cliff team, so I head up above the station to Fort Point. Florence and I set up the theodolite and computer at the lookout point and start taking half hour watch shifts searching the horizon for the spout of a gray whale. Sometimes you see one right away, but other times it feels like the whales are actively hiding from you. These are the times I wish Maggie was here with her endless supply of Disney soundtracks to help pass the hours.

Imitating a ship’s captain, Quince points toward our whale while shouting “Mark”.

A whale spouts out at Mill Rocks and starts heading across to the jetty. Hurray, its data collection time! I try to quickly move the cross-hairs of the theodolite onto the position of the whale using a set of knobs like those on an etch-a-sketch. As you may understand, it’s not an easy task at first but I manage to do it because I’ve been practicing for three weeks. I say “Mark!” cueing Florence to click a button in the program Pythagoras on the computer to record the whale’s position.

The left hand side of Buttons – notice the scatter of white markings on the upper back.

Meanwhile, Florence sees that the whale has two white spots where the fluke meets the knuckles. Those are identifying marks of the beloved whale, Buttons. This whale has been seen here since 2016 and is a fan favorite for our on-going research program. Florence gets just as excited every time and texts her eagerly awaiting interns of previous years all about the sighting. Of course Buttons is not the only whale to have identifying marks such as scars and pigmentation marks. This is why we make sure to get photos of the whales we spot, allowing us to do photo-ID analysis on them through comparison to our database of pictures from previous years.

Quince practices CPR protocol on a training mannequin on his first day.

So far I have gained skill after skill in this internship. I got CPR certified, took a kayak training class, learned how to use a theodolite, and have spent many educational (and frustrating) hours entering data in Excel. I joined the program because I was interested in all of these things. It surprised me that I was developing a relationship with the whales I’m researching. By the end of August I’m now sure that I will also know many of the whales by name. I will probably be much better at using an etch-a-sketch, and I will have had my first taste at what being a scientist is like. What I strive for, however, is to have the same look in my eyes that appears in Florence’s whenever a familiar whale decides to browse our kelp beds.

Curiosity and Community, new ways of exploring our environment.

By Nathan Malamud, GEMM Lab summer intern, Pacific High School senior

I am someone who has lived in a small town for all his life. Pretty much everyone knows each other by their first name and my graduating class only has around 20 people. Everywhere you look you will find a farm, ranch, or cranberry bog (even our school has two bogs of their own!). Because of my small town life, I have a strong sense of community. However, I have also developed a curiosity about natural and global phenomena. I try to connect these two virtues by participating in scientific efforts that help my community. When I heard that the OSU Port Orford Field Station was offering internships, I knew right away that it would definitely be a great experience for me.

The view from our field site at Fort Point in Port Orford

Port Orford, on Oregon’s southern coast, is a town that is closely tied to the ocean. So naturally, it’s important to understand and monitor our surroundings so that our town can thrive. Last year, my Marine Science class helped me further understand the complexity of the ocean. Our first semester taught us all about marine biology, zoology, and ecology. Our second semester immersed us into oceanography, ocean geology, and ocean chemistry. During the second semester, we also took trips to our town’s marine science center and to the marine reserve near Rocky Point. I loved this course and decided to try to expand my knowledge about the subject by going to the OSU Field Station.

Our safety instructor teaches takes us through basic paddling techniques

As an intern, I am currently working with three teammates to understand the feeding behavior of gray whales – what places they like to eat zooplankton the most and why they like to eat there. This whale project helps our community by Port Orford enabling high school students to perform college-level scientific research and inquiry, as well as allowing us to learn valuable skills such as CPR, surveying using a theodolite, working with chemicals in a lab, and data processing.

We had to learn how to rescue ourselves just in case we have an accident in the boat.

This internship with OSU’s GEMM Lab has taught me many new skills and given me new experiences that I have never had before. Before this internship, I had never been in a kayak. Now, I go out on the water nearly every other day! When on the water, I always try to sharpen my navigating skills. I use a GPS to pinpoint the locations of our sampling stations, and I communicate to my partner where we need to go and how we will get there.

Its very important to stretch before kayaking every morning.

Once we are there, it is my job to keep the boat close to the station location so that my partner can get accurate samples. This part is a very tricky task, because not only do I have to pay attention to the GPS to make sure we are within 10 meters of the spot, but I also have to pay attention to my surroundings. I have to look at the ocean, and figure out what direction the waves are coming from. I have to watch how external forces, like wind and currents, can cause the boat to drift far from station, and I have to correct drifting with gentle paddle strokes. This is hard, especially since the kayak is so light and easy to get pushed around by the wind. However, despite the difficulty, I have learned that it is crucial not to panic. Frustration only makes things worse. The key is to maintain a harmonic balance of concentration and zen.

I have also learned that when collecting data in the field, it’s important to observe and document as much as possible. When we are in the kayak, we have 12 stations that we try to visit every day (as long as the weather cooperates). At each station, we first use a secchi disk to test the water clarity, then lower the GoPro to film the water column and see where the zooplankton are. Sometimes we catch other interesting things on the video too, such as siphonophores (my personal favorites are jellies and salps) and rockfish.

Next we tow a zooplankton net through the water, and let it collect zooplankton of all shapes and sizes, from tiny mysids to skeleton shrimp. Then we proceed to the next station and repeat the process. We have to remember to label everything, and tell the GoPro camera what station we’re at so we can sort all the information correctly when we get back to the field station. At the end of the day, we log our data into a computer, and preserve half our plankton samples with ethanol, so that we can identify the species present. The other half gets frozen for caloric content analysis by our collaborator Dr. Kim Bernard to help us understand how much zooplankton a whale needs to eat to meet its energy needs each day.

By repeating this entire process every day, we are able to look at daily changes, which also helps us to better understand why whales spend time in certain areas and not others. Be sure to check out my teammate Maggie’s blog post about some of the tools and technologies we use to track the whales!

This whale project has been, and definitely still is, a great experience for me! I have learned a lot and have worked with some amazing people. I believe that I am learning many valuable skills, and that the skills I learn will allow me to help my community.

A Little Slice of Heaven

Guest writer: Maggie O’Rourke-Liggett, GEMM Lab summer intern, Oregon State University,

One of the biggest obstacles an undergraduate can face is fulfilling the degree requirement of completing an internship or research opportunity. With almost every university and degree program requiring it for graduation and many employers requiring prior experience, the amount of pressure and competition is intense.

After being rejected from the internships I applied for earlier in the year, I heard about Dr. Leigh Torres’s research with the Geospatial Ecology of Marine Megafauna (GEMM) Lab . I decided to email her and ask if she had any open positions. Fast-forward a few weeks and I am collaborating with Florence Sullivan, a recent masters graduate from OSU, on the logistics of my Gray Whale Foraging Behavior internship with the GEMM Lab.

My workstation while I conduct photo identification analysis in the field station classroom. The photos are displayed and organized in Adobe Bridge. Source: Maggie O’Rourke-Liggett

During my time with the GEMM Lab team, I have been assisting with photo identification analysis of gray whales (Eschrichtius robustus), using a theodolite and Pythagoras computer program to track their movements, collecting samples of the zooplankton they eat, and recording other oceanographic data with our time-depth recorder. This project is hoping to identify the drivers of gray whale fine-scale foraging behavior. For instance: Why do gray whales spend more time in some areas than others? Does the type or density of prey affect their behavior? Do the whales use static features like kelp beds to help find their food? As a senior currently studying oceanography, who desires to study whale behavior in the future, this internship is like finding a gold mine.

Nathan Malamud, our other high school intern, and I working together to set up the theodolite in backyard during a practice run. Source: Florence Sullivan

Ever since day one at Hatfield Marine Science Center, I’ve been working with people who share the same passions for marine mammals as me. Spending hours upon hours sorting thousands of pictures may seem like a painful, tedious job, but knowing my work helps others to update existing identification catalogs makes it worthwhile. Plus, who wouldn’t want to look at whales all day?! After a while, you start to recognize specific individuals based on their various pigment configurations and scars. Once you can recognize individuals, it makes the sorting go by faster and helps with recognizing individual whales in the wild faster. It’s always exciting to sort through the photos and observe from the cliff or kayak and recognize a whale from the photo identification work.

After Florence taught me how to set up and operate the theodolite, a survey tool used to track a whale’s movements, we taught a class to undergrads on how to use it. I’ll never get over how people’s faces lit up when we discussed how the instrument works and its role in the overall mission.

Quince Nye, one of our high school interns, using side strokes to stabilize the kayak while I deploy our zooplankton net over the side with a down rigger. Source: Florence Sullivan

These past two weeks at OSU’s Port Orford Field Station have been like living on a little slice of heaven. My days are filled with clear views of the coast and the sound of waves crashing serve as a backdrop on my home for the month, the bed-and-breakfast turned field station. Each morning, the sun fills my room as I gather my gear for the day and help my teammates load the truck. We spend long days on the water collecting zooplankton samples and GoPro video or on the cliff recording whale behavior through the theodolite. To anyone searching for an internship and feeling burnt out from completing application after application, don’t give up. You’ll find your slice of heaven too.

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North Pacific Albatrosses

Reasons for Albatross Bycatch

Implications

Inspecting the Catch

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