Tag: Seabirds

A MOSAIC of species, datasets, tools, and collaborators

By Dr. Dawn Barlow, Postdoctoral Scholar, OSU Department of Fisheries, Wildlife, and Conservation Sciences, Geospatial Ecology of Marine Megafauna Lab

Imagine you are 50 nautical miles from shore, perched on the observation platform of a research vessel. The ocean is blue, calm, and seems—for all intents and purposes—empty. No birds fly overhead, nothing disturbs the rolling swells except the occasional whitecap from a light breeze. The view through your binoculars is excellent, and in the distance, you spot a disturbance at the surface of the water. As the ship gets closer, you see splashing, and a flurry of activity emerges as a large group of dolphins leap and dive, likely chasing a school of fish. They swim along with the ship, riding the bow-wave in a brief break from their activity. Birds circle in the air above them and float on the water around them. Together with your team of observers, you rush to record the species, the number of animals, their distance to the ship, and their behavior. The research vessel carries along its pre-determined trackline, and the feeding frenzy of birds and dolphins fades off behind you as quickly as it came. You return to scanning the blue water.

Craig Hayslip and Dawn Barlow scan for marine mammals from the crow’s nest (elevated observation platform) of the R/V Pacific Storm.

The marine environment is highly dynamic, and resources in the ocean are notoriously patchy. One of our main objectives in marine ecology is to understand what drives these ephemeral hotspots of species diversity and biological activity. This objective is particularly important now as the oceans warm and shift. In the context of rapid global climate change, there is a push to establish alternatives to fossil fuels that can support society’s energy needs while minimizing the carbon emissions that are a root cause of climate change. One emergent option is offshore wind, which has become a hot topic on the West Coast of the United States in recent years. The technology has the potential to supply a clean energy source, but the infrastructure could have environmental and societal impacts of its own, depending on where it is placed, how it is implemented, and when it is operational.

Northern right whale dolphins leap into the air. Photo by Craig Hayslip.

Any development in the marine environment, including alternative energy such as offshore wind, should be undertaken using the best available scientific knowledge of the ecosystem where it will be implemented. The Marine Mammal Institute’s collaborative project, Marine Offshore Species Assessments to Inform Clean energy (MOSAIC), was designed for just this reason. As the name “MOSAIC” implies, it is all about using different tools to compile different datasets to establish crucial baseline information on where marine mammals and seabirds are distributed in Oregon and Northern California, a region of interest for wind energy development.

A MOSAIC of species

The waters of Oregon and Northern California are rich with life. Numerous cetaceans are found here, from the largest species to ever live, the blue whale, to one of the smallest cetaceans, the harbor porpoise, with many species filling in the size range in between: fin whales, humpback whales, sperm whales, killer whales, Risso’s dolphins, Pacific white-sided dolphins, northern right whale dolphins, and Dall’s porpoises, to name a few. Seabirds likewise rely on these productive waters, from the large, graceful albatrosses that feature in maritime legends, to charismatic tufted puffins, to the little Leach’s storm petrels that could fit in the palm of your hand yet cover vast distances at sea. From our data collection efforts so far, we have already documented 16 cetacean species and 64 seabird species.

A Laysan albatross glides over the water’s surface. Photo by Will Kennerley.

A MOSAIC of data and tools

Schematic of the different components of the MOSAIC project. Graphic created by Solene Derville.

Through the four-year MOSAIC project, we are undertaking two years of visual surveys and passive acoustic monitoring from Cape Mendocino to the mouth of the Columbia River on the border of Oregon and Washington and seaward to the continental slope. Six comprehensive surveys for cetaceans and seabirds are being conducted aboard the R/V Pacific Storm following a carefully chosen trackline to cover a variety of habitats, including areas of interest to wind energy developers.

These dedicated surveys are complemented by additional surveys conducted aboard NOAA research vessels during collaborative expeditions in the Northern California Current, and ongoing aerial surveys in partnership with the United States Coast Guard through the GEMM Lab’s OPAL project. Three bottom-mounted hydrophones were deployed in August 2022, and are recording cetacean vocalizations and the ambient soundscape, and these recordings will be complemented by acoustic data that is being collected continuously by the Oceans Observing Initiative. In addition to these methods to collect broad-scale species distribution information, concurrent efforts are being conducted via small boats to collect individual identification photographs of baleen whales and tissue biopsy samples for genetic analysis. Building on the legacy of satellite tracking here at the Marine Mammal Institute, the MOSAIC project is breathing new life into tag data from large whales to assess movement patterns over many years and determine the amount of time spent within our study area.

A curious fin whale approaches the R/V Pacific Storm during one of the visual surveys. Photo by Craig Hayslip.
Survey tracklines extending between the Columbia River and Cape Mendocino, designed for the MOSAIC visual surveys aboard the R/V Pacific Storm.

The resulting species occurrence data from visual surveys and acoustic monitoring will be integrated to develop Species Distribution Models for the many different species in our study region. Identification photographs of individual baleen whales, DNA profiles from whale biopsy samples, and data from satellite-tagged whales will provide detailed insight into whale population structure, behavior, and site fidelity (i.e., how long they typically stay in a given area), which will add important context to the distribution data we collect through the visual surveys and acoustic monitoring. The models will be implemented to produce maps of predicted species occurrence patterns, describing when and where we expect different cetaceans and seabirds to be under different environmental conditions.

With five visual surveys down, the MOSAIC team is gearing up for one final survey this month. The hydrophones will be retrieved this summer. Then, with data in-hand, the team will dive deep into analysis.

A MOSAIC of collaborators

The MOSAIC-4 team waves from the crow’s nest (observation platform) of the R/V Pacific Storm. Photo by Craig Hayslip.

The collaborative MOSAIC team brings together a diverse set of tools. The depth of expertise here at the Marine Mammal Institute spans a broad range of disciplines, well-positioned to provide robust scientific knowledge needed to inform alternative energy development in Oregon and Northern California waters.  

I have had the pleasure of participating in three of the six surveys aboard the R/V Pacific Storm, including leading one as Chief Scientist, and have collected visual survey data aboard NOAA Ship Bell M. Shimada and from United States Coast Guard helicopters over the years that will be incorporated in the MOSAIC of datasets for the project. This ecosystem is one that I feel deeply connected to from time spent in the field. Now, I am thrilled to dive into the analysis, and will lead the modeling of the visual survey data and the integration of the different components to produce species distribution maps for cetaceans and seabirds our study region.

This project is funded by the United States Department of Energy. The Principal Investigator is the Institute’s Director Dr. Lisa Ballance, and Co-Principal Investigators include Scott Baker, Barbara Lagerquist, Rachael Orben, Daniel Palacios, Kate Stafford, and Leigh Torres of the Marine Mammal Institute; John Calambokidis of the Cascadia Research Collective; and Elizabeth Becker of ManTech International Corp. For more information, please visit the project website, and stay tuned for updates as we enter the analysis phase.

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Marine megafauna as ecosystem sentinels: What animals can tell us about changing oceans

By Dawn Barlow1 and Will Kennerley2

1PhD Candidate, OSU Department of Fisheries, Wildlife, and Conservation Sciences, Geospatial Ecology of Marine Megafauna Lab

2MS Student, OSU Department of Fisheries, Wildlife, and Conservation Sciences, Seabird Oceanography Lab

The marine environment is dynamic, and mobile animals must respond to the patchy and ephemeral availability of resource in order to make a living (Hyrenbach et al. 2000). Climate change is making ocean ecosystems increasingly unstable, yet these novel conditions can be difficult to document given the vast depth and remoteness of most ocean locations. Marine megafauna species such as marine mammals and seabirds integrate ecological processes that are often difficult to observe directly, by shifting patterns in their distribution, behavior, physiology, and life history in response to changes in their environment (Croll et al. 1998, Hazen et al. 2019). These mobile marine animals now face additional challenges as rising temperatures due to global climate change impact marine ecosystems worldwide (Hazen et al. 2013, Sydeman et al. 2015, Silber et al. 2017, Becker et al. 2019). Given their mobility, visibility, and integration of ocean processes across spatial and temporal scales, these marine predator species have earned the reputation as effective ecosystem sentinels. As sentinels, they have the capacity to shed light on ecosystem function, identify risks to human health, and even predict future changes (Hazen et al. 2019). So, let’s explore a few examples of how studying marine megafauna has revealed important new insights, pointing toward the importance of monitoring these sentinels in a rapidly changing ocean.

Cairns (1988) is often credited as first promoting seabirds as ecosystem sentinels and noted several key reasons why they were perfect for this role: (1) Seabirds are abundant, wide-ranging, and conspicuous, (2) although they feed at sea, they must return to land to nest, allowing easier observation and quantification of demographic responses, often at a fraction of the cost of traditional, ship-based oceanographic surveys, and therefore (3) parameters such as seabird reproductive success or activity budgets may respond to changing environmental conditions and provide researchers with metrics by which to assess the current state of that ecosystem.

The unprecedented 2014-2016 North Pacific marine heatwave (“the Blob”) caused extreme ecosystem disruption over an immense swath of the ocean (Cavole et al. 2016). Seabirds offered an effective and morbid indication of the scale of this disruption: Common murres (Uria aalge), an abundant and widespread fish-eating seabird, experienced widespread breeding failure across the North Pacific. Poor reproductive performance suggested that there may have been fewer small forage fish around and that these changes occurred at a large geographic scale. The Blob reached such an extreme as to kill immense numbers of adult birds, which professional and community scientists found washed up on beach-surveys; researchers estimate that an incredible 1,200,000 murres may have died from starvation during this period (Piatt et al. 2020). While the average person along the Northeast Pacific Coast during this time likely didn’t notice any dramatic difference in the ocean, seabirds were shouting at us that something was terribly wrong.

Happily, living seabirds also act as superb ecosystem sentinels. Long-term research in the Gulf of Maine by U.S. and Canadian scientists monitors the prey species provisioned by adult seabirds to their chicks. Will has spent countless hours over five summers helping to conduct this research by watching terns (Sterna spp.) and Atlantic puffins (Fratercula arctica) bring food to their young on small islands off the Maine coast. After doing this work for multiple years, it’s easy to notice that what adults feed their chicks varies from year to year. It was soon realized that these data could offer insight into oceanographic conditions and could even help managers assess the size of regional fish stocks. One of the dominant prey species in this region is Atlantic herring (Clupea harengus), which also happens to be the focus of an economically important fishery.  While the fishery targets four or five-year-old adult herring, the seabirds target smaller, younger herring. By looking at the relative amounts and sizes of young herring collected by these seabirds in the Gulf of Maine, these data can help predict herring recruitment and the relative number of adult herring that may be available to fishers several years in the future (Scopel et al. 2018).  With some continued modelling, the work that we do on a seabird colony in Maine with just a pair of binoculars can support or maybe even replace at least some of the expensive ship-based trawl surveys that are now a popular means of assessing fish stocks.

A common tern (Sterna hirundo) with a young Atlantic herring from the Gulf of Maine, ready to feed its chick (Photo courtesy of the National Audubon Society’s Seabird Institute)

For more far-ranging and inaccessible marine predators such as whales, measuring things such as dietary shifts can be more challenging than it is for seabirds. Nevertheless, whales are valuable ecosystem sentinels as well. Changes in the distribution and migration phenology of specialist foragers such as blue whales (Balaenoptera musculus) and North Atlantic right whales (Eubalaena glacialis) can indicate relative changes in the distribution and abundance of their zooplankton prey and underlying ocean conditions (Hazen et al. 2019). In the case of the critically endangered North Atlantic right whale, their recent declines in reproductive success reflect a broader regime shift in climate and ocean conditions. Reduced copepod prey has resulted in fewer foraging opportunities and changing foraging grounds, which may be insufficient for whales to obtain necessary energetic stores to support calving (Gavrilchuk et al. 2021, Meyer-Gutbrod et al. 2021). These whales assimilate and showcase the broad-scale impacts of climate change on the ecosystem they inhabit.

Blue whales that feed in the rich upwelling system off the coast of California rely on the availability of their krill prey to support the population (Croll et al. 2005). A recent study used acoustic monitoring of blue whale song to examine the timing of annual population-level transition from foraging to breeding migration compared to oceanographic variation, and found that flexibility in timing may be a key adaptation to persistence of this endangered population facing pressures of rapid environmental change (Oestreich et al. 2022). Specifically, blue whales delayed the transition from foraging to breeding migration in years of the highest and most persistent biological productivity from upwelling, and therefore listening to the vocalizations of these whales may be valuable indicator of the state of productivity in the ecosystem.

Figure reproduced from Oestreich et al. 2022, showing relationships between blue whale life-history transition and oceanographic phenology of foraging habitat. Timing of the behavioral transition from foraging to migration (day of year on the y-axis) is compared to (a) the date of upwelling onset; (b) the date of peak upwelling; and (c) total upwelling accumulated from the spring transition to the end of the upwelling season.

In a similar vein, research by the GEMM Lab on blue whale ecology in New Zealand has linked their vocalizations known as D calls to upwelling conditions, demonstrating that these calls likely reflect blue whale foraging opportunities (Barlow et al. 2021). In ongoing analyses, we are finding that these foraging-related calls were drastically reduced during marine heatwave conditions, which we know altered blue whale distribution in the region (Barlow et al. 2020). Now, for the final component of Dawn’s PhD, she is linking year-round environmental conditions to the occurrence patterns of different blue whale vocalization types, hoping to shed light on ecosystem processes by listening to the signals of these ecosystem sentinels.

A blue whale comes up for air in the South Taranaki Bight of New Zealand. photo by L. Torres.

It is important to understand the widespread implications of the rapidly warming climate and changing ocean conditions on valuable and vulnerable marine ecosystems. The cases explored here in this blog exemplify the importance of monitoring these marine megafauna sentinel species, both now and into the future, as they reflect the health of the ecosystems they inhabit.

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References:

Barlow DR, Bernard KS, Escobar-Flores P, Palacios DM, Torres LG (2020) Links in the trophic chain: Modeling functional relationships between in situ oceanography, krill, and blue whale distribution under different oceanographic regimes. Mar Ecol Prog Ser 642:207–225.

Barlow DR, Klinck H, Ponirakis D, Garvey C, Torres LG (2021) Temporal and spatial lags between wind, coastal upwelling, and blue whale occurrence. Sci Rep 11:1–10.

Becker EA, Forney KA, Redfern J V., Barlow J, Jacox MG, Roberts JJ, Palacios DM (2019) Predicting cetacean abundance and distribution in a changing climate. Divers Distrib 25:626–643.

Cairns DK (1988) Seabirds as indicators of marine food supplies. Biol Oceanogr 5:261–271.

Cavole LM, Demko AM, Diner RE, Giddings A, Koester I, Pagniello CMLS, Paulsen ML, Ramirez-Valdez A, Schwenck SM, Yen NK, Zill ME, Franks PJS (2016) Biological impacts of the 2013–2015 warm-water anomaly in the northeast Pacific: Winners, losers, and the future. Oceanography 29:273–285.

Croll DA, Marinovic B, Benson S, Chavez FP, Black N, Ternullo R, Tershy BR (2005) From wind to whales: Trophic links in a coastal upwelling system. Mar Ecol Prog Ser 289:117–130.

Croll DA, Tershy BR, Hewitt RP, Demer DA, Fiedler PC, Smith SE, Armstrong W, Popp JM, Kiekhefer T, Lopez VR, Urban J, Gendron D (1998) An integrated approch to the foraging ecology of marine birds and mammals. Deep Res Part II Top Stud Oceanogr.

Gavrilchuk K, Lesage V, Fortune SME, Trites AW, Plourde S (2021) Foraging habitat of North Atlantic right whales has declined in the Gulf of St. Lawrence, Canada, and may be insufficient for successful reproduction. Endanger Species Res 44:113–136.

Hazen EL, Abrahms B, Brodie S, Carroll G, Jacox MG, Savoca MS, Scales KL, Sydeman WJ, Bograd SJ (2019) Marine top predators as climate and ecosystem sentinels. Front Ecol Environ 17:565–574.

Hazen EL, Jorgensen S, Rykaczewski RR, Bograd SJ, Foley DG, Jonsen ID, Shaffer SA, Dunne JP, Costa DP, Crowder LB, Block BA (2013) Predicted habitat shifts of Pacific top predators in a changing climate. Nat Clim Chang 3:234–238.

Hyrenbach KD, Forney KA, Dayton PK (2000) Marine protected areas and ocean basin management. Aquat Conserv Mar Freshw Ecosyst 10:437–458.

Meyer-Gutbrod EL, Greene CH, Davies KTA, Johns DG (2021) Ocean regime shift is driving collapse of the north atlantic right whale population. Oceanography 34:22–31.

Oestreich WK, Abrahms B, Mckenna MF, Goldbogen JA, Crowder LB, Ryan JP (2022) Acoustic signature reveals blue whales tune life history transitions to oceanographic conditions. Funct Ecol.

Piatt JF, Parrish JK, Renner HM, Schoen SK, Jones TT, Arimitsu ML, Kuletz KJ, Bodenstein B, Garcia-Reyes M, Duerr RS, Corcoran RM, Kaler RSA, McChesney J, Golightly RT, Coletti HA, Suryan RM, Burgess HK, Lindsey J, Lindquist K, Warzybok PM, Jahncke J, Roletto J, Sydeman WJ (2020) Extreme mortality and reproductive failure of common murres resulting from the northeast Pacific marine heatwave of 2014-2016. PLoS One 15:e0226087.

Scopel LC, Diamond AW, Kress SW, Hards AR, Shannon P (2018) Seabird diets as bioindicators of atlantic herring recruitment and stock size: A new tool for ecosystem-based fisheries management. Can J Fish Aquat Sci.

Silber GK, Lettrich MD, Thomas PO, Baker JD, Baumgartner M, Becker EA, Boveng P, Dick DM, Fiechter J, Forcada J, Forney KA, Griffis RB, Hare JA, Hobday AJ, Howell D, Laidre KL, Mantua N, Quakenbush L, Santora JA, Stafford KM, Spencer P, Stock C, Sydeman W, Van Houtan K, Waples RS (2017) Projecting marine mammal distribution in a changing climate. Front Mar Sci 4:413.

Sydeman WJ, Poloczanska E, Reed TE, Thompson SA (2015) Climate change and marine vertebrates. Science 350:772–777.

Dolphin Diets: Common bottlenose dolphin prey preferences off California

By: Alexa Kownacki, Ph.D. Student, OSU Department of Fisheries and Wildlife, Geospatial Ecology of Marine Megafauna Lab 

Humans are fascinated by food. We want to know its source, its nutrient content, when it was harvested and by whom, and so much more. Since childhood, I was the nagging child who interrogated wait staff about the seafood menu because I cared about the sustainability aspect as well as consuming ethically-sourced seafood. Decades later I still do the same: ask a myriad of questions from restaurants and stores in order to eat as sustainably as possible. But in addition to asking these questions about my food, I also question what my study species eats and why. My study populations, common bottlenose dolphins, are described as top opportunistic predators (Norris and Prescott 1961, Shane et al. 1986, Barros and Odell 1990). In my study area off of California, this species exists in two ecotypes. The coastal ecotype off of California, USA are generalist predators, feeding on many different species of fish using different foraging techniques (Ballance 1992, Shane 1990). The offshore ecotype, on the other hand, is less well-studied, but is frequently observed in association with sperm whales, although the reason is still unknown (Díaz-Gamboa et al. 2018). Stable isotope analysis from skin samples from the two ecotypes indicates that the ecotypes exhibit different foraging strategies based on different isotopic carbon and nitrogen levels (Díaz-Gamboa et al. 2018).

Growing up, I kept the Monterey Bay Aquarium’s Seafood Watch Guide with me to choose the most sustainably-sourced seafood at restaurants. Today there is an easy-to-use application for mobile phones that replaced the paper guide. (Image Source: https://www.seafoodwatch.org/)

Preliminary and historical data on common bottlenose dolphins (Tursiops truncatus) suggest that the coastal ecotype spend more time near estuary mouths than offshore dolphins (Ballance 1992, Kownacki et al. unpublished data). Estuaries contain large concentrations of nutrients from runoff, which support zooplankton and fishes. It is for this reason that these estuaries are thought to be hotspots for bottlenose dolphin foraging. Some scientists hypothesize that these dolphins are estuarine-based prey specialists (Barros and Odell 1990), or that the dolphins simply aggregate in estuaries due to higher prey abundance (Ballance 1992).

Coastal bottlenose dolphins traveling near an estuary mouth in San Diego, CA. (Photographed under NOAA NMFS Permit # 19091).

In an effort to understand diet compositions of bottlenose dolphins, during coastal surveys seabirds were recorded in association with feeding groups of dolphins. Therefore, it is reasonable to believe that dolphins were feeding on the same fishes as Brown pelicans, blue-footed and brown boobies, double-crested cormorants, and magnificent frigatebirds, seeing as they were the most common species associated with bottlenose dolphin feeding groups (Ballance 1992). A shore-based study by Hanson and Defran (1993) found that coastal dolphins fed more often in the early morning and late afternoon, as well as during periods of high tide current. These patterns may have to do with the temporal and spatial distribution of prey fish species. From the few diet studies conducted on these bottlenose dolphins in this area, 75% of the prey were species from the families Ebiotocidae (surf perches) and Sciaendae (croakers) (Norris and Prescott 1961, Walker 1981). These studies, in addition to optimal foraging models, suggest this coastal ecotype may not be as much of a generalist as originally suggested (Defran et al. 1999).

A redtail surfperch caught by a fisherman from a beach in San Diego, CA. These fish are thought to be common prey of coastal bottlenose dolphins. (Image Source: FishwithJD)

Diet studies on the offshore ecotype of bottlenose dolphins worldwide show a preference for cephalopods, similar to other toothed cetaceans who occupy similar regions, such as Risso’s dolphin, sperm whales, and pilot whales (Clarke 1986, Cockcroft and Ross 1990, Gonzalez et al. 1994, Barros et al. 2000, Walker et al. 1999). Because these animals seldom strand on accessible beaches, stomach contents analyses are limited to few studies and isotope analysis is more widely available from biopsies. We know these dolphins are sighted in deeper waters than the habitat of coastal dolphins where there are fewer nutrient plumes, so it is reasonable to hypothesize that the offshore ecotype consumes different species and may be more specialized than the coastal ecotype.

An bottlenose dolphin forages on an octopus. (Image source: Mandurah Cruises)

For a species that is so often observed from shore and boats, and is known for its charisma, it may be surprising that the diets of both the coastal and offshore bottlenose dolphins are still largely unknown. Such is the challenge of studying animals that live and feed underwater. I wish I could simply ask a dolphin, much like I would ask staff at restaurants: what is on the menu today? But, unfortunately, that is not possible. Instead, we must make educated hypotheses about the diets of both ecotypes based on necropsies and stable isotope studies, and behavioral and spatial surveys. And, I will continue to look to new technologies and creative thinking to provide the answers we are seeking.

Literature cited:

Ballance, L. T. (1992). Habitat use patterns and ranges of the bottlenose dolphin in the Gulf of California, Mexico. Marine Mammal Science, 8(3), 262-274.

Barros, N.B., and D. K. Odell. (1990). Food habits of bottlenose dolphins in the southeastern United States. Pages 309-328 in S. Leatherwood and R. R. Reeves, eds. The bottlenose dolphin. Academic Press, San Diego, CA.

Barros, N., E. Parsons and T. Jefferson. (2000). Prey of bottlenose dolphins from the South China Sea. Aquatic Mammals 26:2–6.

Clarke, M. 1986. Cephalopods in the diet of odontocetes. Pages 281–321 in M. Bryden and R. Harrison, eds. Research on dolphins. Clarendon Press, Oxford, NY.

Cockcroft, V., and G. Ross. (1990). Food and feeding of the Indian Ocean bottlenose dolphin off southern Natal, South Africa. Pages 295–308 in S. Leatherwood and R. R. Reeves, eds. The bottlenose dolphin. Academic Press, San Diego, CA.

Defran, R. H., Weller, D. W., Kelly, D. L., & Espinosa, M. A. (1999). Range characteristics of Pacific coast bottlenose dolphins (Tursiops truncatus) in the Southern California Bight. Marine Mammal Science, 15(2), 381-393.

Díaz‐Gamboa, R. E., Gendron, D., & Busquets‐Vass, G. (2018). Isotopic niche width differentiation between common bottlenose dolphin ecotypes and sperm whales in the Gulf of California. Marine Mammal Science, 34(2), 440-457.

Gonzalez, A., A. Lopez, A. Guerra and A. Barreiro. (1994). Diets of marine mammals stranded on the northwestern Spanish Atlantic coast with special reference to Cephalopoda. Fisheries Research 21:179–191.

Hanson, M. T., and Defran, R. H. (1993). The behavior and feeding ecology of the Pacific coast bottlenose dolphin, Tursiops truncatus. Aquatic Mammals, 19, 127-127.

Norris, K. S., and J. H. Prescott. (1961). Observations on Pacific cetaceans of Californian and Mexican waters. University of California Publications of Zoology 63:29, 1-402.

Shane, S. H. (1990). Comparison of bottlenose dolphin behavior in Texas and Florida, with a critique of methods for studying dolphin behavior. Pages 541-558 in S. Leatherwood and R. R. Reeves, eds. The bottlenose dolphin. Academic Press, San Diego, CA.

Shane, S., R. Wells and B. Wursig. (1986). Ecology, behavior and social organization of bottlenose dolphin: A review. Marine Mammal Science 2:34–63.

Walker, W.A. (1981). Geographical variation in morphology and biology of the bottlenose dolphins (Tursiops) in the eastern North Pacific. NMFS/SWFC Administrative Report. No, LJ-91-03C.

Walker, J., C. Potter and S. Macko. (1999). The diets of modern and historic bottlenose dolphin populations reflected through stable isotopes. Marine Mammal Science 15:335–350.

Midway Atoll: the next two weeks at the largest albatross colony in the world (two years later)

By Rachael Orben, Assistant Professor (Senior Research), Seabird Oceanography Lab

This February I had the opportunity to spend two weeks at Midway Atoll National Wildlife Refuge in the Papahānaumokuākea Marine National Monument. I was there to GPS track black-footed and Laysan albatross during their short chick-brooding foraging trips. Two weeks is just enough time since the albatross are taking short trips (3-5 days) to feed their rapidly growing chicks.

My first visit to Midway (2016 blog post) occurred right as the black-footed albatross chicks were hatching (quickly followed by the Laysan albatross chicks). This time, we arrived almost exactly when I had left off. The oldest chicks were just about two weeks old. This shift in phenology meant that, though subtle, each day offered new insights for me as I watched chicks transform into large aware and semi-mobile birds. By the time we left, unattended chicks were rapidly multiplying as the adults shifted to the chick-rearing stage. During chick rearing, both parents leave the chick unattended and take longer foraging trips.

Our research goal was to collect tracking data from both species that can be used to address a couple of research questions. First of all, winds can aid, or hinder albatross foraging and flight efficiency (particularly during the short brooding trips). In the North Pacific, the strength and direction of the winds are influenced by the ENSO (El Niño Southern Oscillation) cycles. The day after we left Midway, NOAA issued an El Niño advisory indicating weak El Nino conditions. We know from previous work at Tern Island (farther east and farther south at 23.87 N, -166.28 W) that El Niño improves foraging for Laysan albatrosses during chick brooding, while during La Niña reproductive success is lower (Thorne et al., 2016). However, since Midway is farther north, and farther west the scenario might be different there. Multiple years of GPS tracking data are needed to address this question and we hope to return to collect more data next year (especially if  La Niña follows the El Niño as is often the case).

We will also overlap the tracking data with fishing boat locations from the Global Fishing Watch database to assess the potential for birds from Midway to interact with high seas fisheries during this time of year (project description, associated blog post). Finally, many of the tags we deployed incorporated a barometric pressure sensor and the data can be used to estimate flight heights relative to environmental conditions such as wind strength. This type of data is key to assessing the impact of offshore wind energy (Kelsey et al., 2018).

How to track an albatross

To track an albatross we use small GPS tags that we tape to the back feathers. After the bird returns from a foraging trip, we remove the tape from the feathers and take the datalogger off. Then we recharge the battery and download the data!

This research is a collaboration between Lesley Thorne (Stony Brook University), Scott Shaffer (San Jose State University), myself (Oregon State University), and Melinda Conners (Washington State University). The field effort was generously supported by the Laurie Landeau Foundation via the Minghua Zhang Early Career Faculty Innovation Fund at Stoney Brook University to Lesley Thorne.

My previous visit to Midway occurred just after house mice were discovered attacking incubating adult albatrosses. Since then, a lot of thought and effort had gone into developing a plan to eradicate mice from Midway. You can find out more via Island Conservation’s Midway blogs and the USFWS.

References

Kelsey, E. C., Felis, J. J., Czapanskiy, M., Pereksta, D. M., & Adams, J. (2018). Collision and displacement vulnerability to offshore wind energy infrastructure among marine birds of the Pacific Outer Continental Shelf. Journal of Environmental Management, 227, 229–247. http://doi.org/10.1016/j.jenvman.2018.08.051

Thorne, L. H., Conners, M. G., Hazen, E. L., Bograd, S. J., Antolos, M., Costa, D. P., & Shaffer, S. A. (2016). Effects of El Niño-driven changes in wind patterns on North Pacific albatrosses. Journal of the Royal Society Interface, 13(119), 20160196. http://doi.org/10.1098/rsif.2016.0196

GEMM Lab 2018: A Year in the Life

By Dawn Barlow, PhD student, Department of Fisheries & Wildlife, Geospatial Ecology of Marine Megafauna Lab

As 2018 draws to a close, it is gratifying to step back and appreciate the accomplishments of the past year. For all members of the GEMM Lab, 2018 has certainly been one for the books! Here are some of our highlights for your holiday enjoyment.

We conducted fieldwork to collect new data in multiple seasons, multiple hemispheres, and across oceans. For the first time, GEMM Lab members joined the Northern California Current Ecosystem cruises aboard NOAA ship Bell M. Shimada as marine mammal observers—Florence in February, Alexa in May, and me in September.

Summertime in the Pacific Northwest brings the gray whales to the Oregon Coast. The drone-flying, poop-scooping, plankton-trapping team of Leigh, Todd, Leila, Joe, and Sharon took to the water for the third year to investigate the health of this gray whale population. It was a successful field season, ending with 72 fecal samples collected! Visiting students joined our experienced members to shadow the gray whale fieldwork—Julia Stepanuk and Alejandro Fernandez Ajo came from across the country to hop on board with us for a bit. Friendship and collaboration were built quickly in a little boat chasing after whale poop, bonding over peanut butter and jelly sandwiches.

Another GEMM Lab team tracked the gray whales from the cliff in Port Orford. Lisa Hildebrand joined us as the GEMM Lab’s newest graduate student, and immediately led a team of interns on Oregon’s southern coast to track gray whale movements and sample their prey from a trusty research kayak.

The summer 2018 gray whale foraging ecology team, affectionately known as “team whale storm”, at the Port Orford Field Station.

Rachael observed seabirds from Yaquina Head in May and June, where the colony of common murres had the highest reproductive success in 10 years! Then she left the summertime in July to travel to the other end of the world, braving winter in the remote South Atlantic to study South American fur seals in the Falkland Islands.

Dr. Rachael Orben and Dr. Alistair Bayliss looking out towards the fur seals. Photo: Kayleigh Jones

In New Caledonia, Solene and a research team ventured to Antigonia Seamount and Orne Bank to study the use of these offshore areas by breeding humpback whales. They collected numerous biopsy samples and successfully deployed satellite tags. Solene was also selected to receive the Louis Herman research scholarship to continue studying humpback whale movement and diving behavior around seamounts.

Sorting biopsy samples during a successful expedition to study humpback whales around remote seamounts in the South Pacific.

Beyond fieldwork, our members have been busily disseminating our findings. In July, Leigh and I traveled to Wellington to present our latest findings on New Zealand blue whales to scientists, managers, politicians, industry representatives, and advocacy groups. Because of our documentation of a unique New Zealand blue whale population, which was published earlier this year, the New Zealand government has proposed to create a Marine Mammal Sanctuary for the protection of blue whales. This is quite a feat, considering blue whales were classified as only “migrant” in New Zealand waters prior to our work. Fueled by flat whites in wintery Wellington, we navigated government buildings, discussing blue whale distribution patterns, overlap with the oil and gas industry, what we now know based on our latest analyses, and what we consider to be the most pressing gaps in our knowledge.

Dr. Leigh Torres and Dawn Barlow in front of Parliament in Wellington, New Zealand following the presentation of their recent findings.

Alexa spent the summer and fall in San Diego, where she collaborated with researchers at NOAA Southwest Fisheries Science Center on her study of about the health of bottlenose dolphins off the California coast. Her time down south has been productive and we look forward to having her back in Oregon with us to round out the second year of her PhD program.

In the fall, Dom and Leigh participated in the first ever Oregon Sea Otter Status of Knowledge Symposium. With growing interest in a potential sea otter reintroduction, the symposium brought together a range of experts – including scientists, managers, and tribes – to discuss what we currently know about sea otters in other regions and how this knowledge could be applied to an Oregon reintroduction effort. Dom was one of many speakers at this event, and gave a well-received talk on Oregon’s previous sea otter reintroduction attempt and brief discussion on his thesis research. Over the next year, Dom not only plans to finish his thesis, but also to join an interdisciplinary research team to further investigate other social, genetic, and ecological implications of a potential sea otter reintroduction.

Sea otter mom and pup. Source: Hakai Magazine.

2018-19 OSU NRT Cohort. Source: Oregon State University.

Several GEMM Lab members reached academic milestones this year. Rachael was promoted to Assistant Professor in the spring! She now leads the Seabird Oceanography Lab, and remains involved in multiple projects studying seabirds and pinnipeds all over the world. Leila passed her PhD qualifying exams and advanced to candidacy in the spring, a major accomplishment toward completing her doctoral degree. I successfully defended my MS degree in June, and my photo was added to our wall gallery of GEMM Lab graduates. I won’t be leaving the GEMM Lab anytime soon, however, as I will be continuing my research on New Zealand blue whales as a PhD student. The GEMM Lab welcomed a new MS student in the summer—Lisa Hildebrand will be studying gray whale foraging ecology on the Oregon Coast. Welcome, Lisa! In early December, Solene successfully defended her PhD, officially becoming Dr. Derville. Congratulations to all on these milestones, and congratulations to Leigh for continuing to grow such a successful lab and guiding us all toward these accomplishments.

Dawn Barlow answers questions during her M.Sc. defense seminar.

Dr. Solene Derville and co-supervisors Dr. Claire Garrigue and Dr. Leigh Torres after a successful PhD Defense!

Perhaps you’re looking to do some reading over the holidays? The GEMM Lab has been publishing up a storm this year! The bulletin board outside our lab is overflowing with new papers. Summarizing our work and sharing our findings with the scientific community is a critical piece of what we do. The 21 new publications this year in 14 scientific journals include contributions from Leigh (13), Rachael (3), Solene (3), Leila (6), Florence (1), Amanda (1), Erin (1), Courtney (1), Theresa (1), and myself (3). Scroll down to the end of this post to see the complete list!

If you are reading this, thank you for your support of our lab, our members, and our work. Our successes come not only from our individual determination, but more importantly from our support of one another and the support of our communities. We look forward to what’s ahead in 2019. Happy holidays from the GEMM Lab!

The whole GEMM Lab (lab dogs included) gathered for an evening playing “Evolution” at Leigh’s house.

Barlow, D. R., Torres, L. G., Hodge, K. B., Steel, D., Baker, C. S., Chandler, T. E., Bott, N., Constantine, R., Double, M. C., Gill, P., Glasgow, D., Hamner, R. M., Lilley, C., Ogle, M., Olson, P. A., Peters, C., Stockin, K. A., Tessaglia-Hymes, C. T., & Klinck, H. (2018). Documentation of a New Zealand blue whale population based on multiple lines of evidence. Endangered Species Research, 36, 27-40.

Barlow, D. R., Fournet, M., & Sharpe, F. (2018). Incorporating tides into the acoustic ecology of humpback whales. Marine Mammal Science.

Baylis, A. M., Tierney, M., Orben, R. A., Staniland, I. J., & Brickle, P. (2018). Geographic variation in the foraging behaviour of South American fur seals. Marine Ecology Progress Series, 596, 233-245.

Bishop, A., Brown, C., Rehberg, M., Torres, L., & Horning, M. (2018). Juvenile Steller sea lion (Eumetopias jubatus) utilization distributions in the Gulf of Alaska. Movement ecology, 6(1), 6.

Burnett, J. D., Lemos, L., Barlow, D., Wing, M. G., Chandler, T., & Torres, L. G. (2018). Estimating morphometric attributes of baleen whales with photogrammetry from small UASs: A case study with blue and gray whales. Marine Mammal Science.

Cardoso, M. D., Lemos, L. S., Roges, E. M., de Moura, J. F., Tavares, D. C., Matias, C. A. R., … & Siciliano, S. (2018). A comprehensive survey of Aeromonas sp. and Vibrio sp. in seabirds from southeastern Brazil: outcomes for public health. Journal of applied microbiology, 124(5), 1283-1293.

Derville, S., Torres, L. G., Iovan, C., & Garrigue, C. (2018). Finding the right fit: Comparative cetacean distribution models using multiple data sources and statistical approaches. Diversity and Distributions, 24(11), 1657-1673.

Derville, S., Torres, L. G., & Garrigue, C. (2018). Social segregation of humpback whales in contrasted coastal and oceanic breeding habitats. Journal of Mammalogy, 99(1), 41-54.

Hann, C. H., Stelle, L. L., Szabo, A., & Torres, L. G. (2018). Obstacles and Opportunities of Using a Mobile App for Marine Mammal Research. ISPRS International Journal of Geo-Information, 7(5), 169.

Holdman, A. K., Haxel, J. H., Klinck, H., & Torres, L. G. (2018). Acoustic monitoring reveals the times and tides of harbor porpoise (Phocoena phocoena) distribution off central Oregon, USA. Marine Mammal Science.

Kirchner, T., Wiley, D. N., Hazen, E. L., Parks, S. E., Torres, L. G., & Friedlaender, A. S. (2018). Hierarchical foraging movement of humpback whales relative to the structure of their prey. Marine Ecology Progress Series, 607, 237-250.

Moura, J. F., Tavares, D. C., Lemos, L. S., Acevedo-Trejos, E., Saint’Pierre, T. D., Siciliano, S., & Merico, A. (2018). Interspecific variation of essential and non-essential trace elements in sympatric seabirds. Environmental pollution, 242, 470-479.

Moura, J. F., Tavares, D. C., Lemos, L. S., Silveira, V. V. B., Siciliano, S., & Hauser-Davis, R. A. (2018). Variation in mercury concentration in juvenile Magellanic penguins during their migration path along the Southwest Atlantic Ocean. Environmental Pollution, 238, 397-403.

Orben, R. A., Kokubun, N., Fleishman, A. B., Will, A. P., Yamamoto, T., Shaffer, S. A., Takahashi, A., & Kitaysky, A. S. (2018). Persistent annual migration patterns of a specialist seabird. Marine Ecology Progress Series, 593, 231-245.

Orben, R. A., Connor, A. J., Suryan, R. M., Ozaki, K., Sato, F., & Deguchi, T. (2018). Ontogenetic changes in at-sea distributions of immature short-tailed albatrosses Phoebastria albatrus. Endangered Species Research, 35, 23-37.

Pickett, E. P., Fraser, W. R., Patterson‐Fraser, D. L., Cimino, M. A., Torres, L. G., & Friedlaender, A. S. (2018). Spatial niche partitioning may promote coexistence of Pygoscelis penguins as climate‐induced sympatry occurs. Ecology and Evolution, 8(19), 9764-9778.

Siciliano, S., Moura, J. F., Tavares, D. C., Kehrig, H. A., Hauser-Davis, R. A., Moreira, I., Lavandier, R., Lemos, L. S., & Quinete, N. S. (2018). Legacy Contamination in Estuarine Dolphin Species From the South American Coast. In Marine Mammal Ecotoxicology (pp. 95-116). Academic Press.

Sullivan, F. A., & Torres, L. G. (2018). Assessment of vessel disturbance to gray whales to inform sustainable ecotourism. The Journal of Wildlife Management, 82(5), 896-905.

Sztukowski, L. A., Cotton, P. A., Weimerskirch, H., Thompson, D. R., Torres, L. G., Sagar, P. M., Knights, A. M., Fayet, A. L., & Votier, S. C. (2018). Sex differences in individual foraging site fidelity of Campbell albatross. Marine Ecology Progress Series, 601, 227-238.

Torres, L. G., Nieukirk, S. L., Lemos, L., & Chandler, T. E. (2018). Drone up! Quantifying whale behavior from a new perspective improves observational capacity. Frontiers in Marine Science, 5.

Yates, K. L., Bouchet, P. J., Caley, M. J., Mengersen, K., Randin, C. F., Parnell, S., … & Sequeira, A. M. M. (2018). Outstanding challenges in the transferability of ecological models. Trends in ecology & evolution.

 

The Recipe for a “Perfect” Marine Mammal and Seabird Cruise

By Alexa Kownacki, Ph.D. Student, OSU Department of Fisheries and Wildlife, Geospatial Ecology of Marine Megafauna Lab

Science—and fieldwork in particular—is known for its failures. There are websites, blogs, and Twitter pages dedicated to them. This is why, when things go according to plan, I rejoice. When they go even better than expected, I practically tear up from amazement. There is no perfect recipe for a great marine mammal and seabird research cruise, but I would suggest that one would look like this:

 A Great Marine Mammal and Seabird Research Cruise Recipe:

  • A heavy pour of fantastic weather
    • Light on the wind and seas
    • Light on the glare
  • Equal parts amazing crew and good communication
  • A splash of positivity
  • A dash of luck
  • A pinch of delicious food
  • Heaps of marine mammal and seabird sightings
  • Heat to approximately 55-80 degrees F and transit for 10 days along transects at 10-12 knots

The end of another beautiful day at sea on the R/V Shimada. Image source: Alexa K.

The Northern California Current Ecosystem (NCCE) is a highly productive area that is home to a wide variety of cetacean species. Many cetaceans are indicator species of ecosystem health as they consume large quantities of prey from different levels in trophic webs and inhabit diverse areas—from deep-diving beaked whales to gray whales traveling thousands of miles along the eastern north Pacific Ocean. Because cetacean surveys are a predominant survey method in large bodies of water, they can be extremely costly. One alternative to dedicated cetacean surveys is using other research vessels as research platforms and effort becomes transect-based and opportunistic—with less flexibility to deviate from predetermined transects. This decreases expenses, creates collaborative research opportunities, and reduces interference in animal behavior as they are never pursued. Observing animals from large, motorized, research vessels (>100ft) at a steady, significant speed (>10kts/hour), provides a baseline for future, joint research efforts. The NCCE is regularly surveyed by government agencies and institutions on transects that have been repeated nearly every season for decades. This historical data provides critical context for environmental and oceanographic dynamics that impact large ecosystems with commercial and recreational implications.

My research cruise took place aboard the 208.5-foot R/V Bell M. Shimada in the first two weeks of May. The cruise was designated for monitoring the NCCE with the additional position of a marine mammal observer. The established guidelines did not allow for deviation from the predetermined transects. Therefore, mammals were surveyed along preset transects. The ship left port in San Francisco, CA and traveled as far north as Cape Meares, OR. The transects ranged from one nautical mile from shore and two hundred miles offshore. Observations occurred during “on effort” which was defined as when the ship was in transit and moving at a speed above 8 knots per hour dependent upon sea state and visibility. All observations took place on the flybridge during conducive weather conditions and in the bridge (one deck below the flybridge) when excessive precipitation was present. The starboard forward quarter: zero to ninety degrees was surveyed—based on the ship’s direction (with the bow at zero degrees). Both naked eye and 7×50 binoculars were used with at least 30 percent of time binoculars in use. To decrease observer fatigue, which could result in fewer detected sightings, the observer (me) rotated on a 40 minutes “on effort”, 20 minutes “off effort” cycle during long transits (>90 minutes).

Alexa on-effort using binoculars to estimate the distance and bearing of a marine mammal sighted off the starboard bow. Image source: Alexa K.

Data was collected using modifications to the SEEbird Wincruz computer program on a ruggedized laptop and a GPS unit was attached. At the beginning of each day and upon changes in conditions, the ship’s heading, weather conditions, visibility, cloud cover, swell height, swell direction, and Beaufort sea state (BSS) were recorded. Once the BSS or visibility was worse than a “5” (1 is “perfect” and 5 is “very poor”) observations ceased until there was improvement in weather. When a marine mammal was sighted the latitude and longitude were recorded with the exact time stamp. Then, I noted how the animal was sighted—either with binoculars or naked eye—and what action was originally noticed—blow, splash, bird, etc. The bearing and distance were noted using binoculars. The animal was given three generalized behavior categories: traveling, feeding, or milling. A sighting was defined as any marine mammal or group of animals. Therefore, a single sighting would have the species and the best, high, and low estimates for group size.

By my definitions, I had the research cruise of my dreams. There were moments when I imagined people joining this trip as a vacation. I *almost* felt guilty. Then, I remember that after watching water for almost 14 hours (thanks to the amazing weather conditions), I worked on data and reports and class work until midnight. That’s the part that no one talks about: the data. Fieldwork is about collecting data. It’s both what I live for and what makes me nervous. The amount of time, effort, and money that is poured into fieldwork is enormous. The acquisition of the data is not as simple as it seems. When I briefly described my position on this research cruise to friends, they interpret it to be something akin to whale-watching. To some extent, this is true. But largely, it’s grueling hours that leave you fatigued. The differences between fieldwork and what I’ll refer to as “everything else” AKA data analysis, proposal writing, manuscript writing, literature reviewing, lab work, and classwork, are the unbroken smile, the vaguely tanned skin, the hours of laughter, the sea spray, and the magical moments that reassure me that I’ve chosen the correct career path.

Alexa photographing a gray whale at sunset near Newport, OR. Image source: Alexa K.

This cruise was the second leg of the Northern California Current Ecosystem (NCCE) survey, I was the sole Marine Mammal and Seabird Observer—a coveted position. Every morning, I would wake up at 0530hrs, grab some breakfast, and climb to the highest deck: the fly-bridge. Akin to being on the top of the world, the fly-bridge has the best views for the widest span. From 0600hrs to 2000hrs I sat, stood, or danced in a one-meter by one-meter corner of the fly-bridge and surveyed. This visual is why people think I’m whale watching. In reality, I am constantly busy. Nonetheless, I had weather and seas that scientists dream about—and for 10 days! To contrast my luck, you can read Florence’s blog about her cruise. On these same transects, in February, Florence experienced 20-foot seas with heavy rain with very few marine mammal sightings—and of those, the only cetaceans she observed were gray whales close to shore. That starkly contrasts my 10 cetacean species with upwards of 45 sightings and my 20-minute hammock power naps on the fly-bridge under the warm sun.

Pacific white-sided dolphins traveling nearby. Image source: Alexa K.

Marine mammal sightings from this cruise included 10 cetacean species: Pacific white-sided dolphin, Dall’s porpoise, unidentified beaked whale, Cuvier’s beaked whale, gray whale, Minke whale, fin whale, Northern right whale dolphin, blue whale, humpback whale, and transient killer whale and one pinniped species: northern fur seal. What better way to illustrate these sightings than with a map? We are a geospatial lab after all.

Cetacean Sightings on the NCCE Cruise in May 2018. Image source: Alexa K.

This map is the result of data collection. However, it does not capture everything that was observed: sea state, weather, ocean conditions, bathymetry, nutrient levels, etc. There are many variables that can be added to maps–like this one (thanks to my GIS classes I can start adding layers!)–that can provide a better understanding of the ecosystem, predator-prey dynamics, animal behavior, and population health.

The catch from a bottom trawl at a station with some fish and a lot of pyrosomes (pink tube-like creatures). Image source: Alexa K.

Being a Ph.D. student can be physically and mentally demanding. So, when I was offered the opportunity to hone my data collection skills, I leapt for it. I’m happiest in the field: the wind in my face, the sunshine on my back, surrounded by cetaceans, and filled with the knowledge that I’m following my passion—and that this data is contributing to the greater scientific community.

Humpback whale photographed traveling southbound. Image source: Alexa K.

Living the Dream – life as a marine mammal observer

By Florence Sullivan, MSc.

Living the dream as a marine mammal observer onboard the R/V Bell Shimada Photo credit: Dave Jacobsen

I first learned that “Marine Mammal Observer” was a legitimate career field during the summer after my junior year at the University of Washington.  I had the good fortune to volunteer for the BASIS fisheries-oceanography survey onboard the R/V Oscar Dyson where I met two wonderful bird observers who taught me how to identify various pelagic bird species and clued me in to just how diverse the marine science job market can be. After the cruise, younger Florence went off with an expanded world view and a small dream that maybe someday she could go out to sea and survey for marine mammals on a regular basis (and get paid for it?!).  Eight years later, I am happy to report that I have just spent the last week as the marine mammal observer on the North California Current Survey on the Dyson’s sister ship, the R/V Bell M. Shimada.  While we may not have seen as many marine mammals as I would have liked, the experience has still been everything younger Florence hoped it would be.

Finally leaving port a few days behind schedule due to stormy weather! photo credit: Florence Sullivan

If you’ve ever wondered why the scientists in your life may refer to summer as “field work season”, it’s because attempting to do research outside in the winter is an exercise in frustration, troubleshooting, and flexibility. Case in point; this cruise was supposed to sail away from port on the 24th of February, but did not end up leaving until the 27th due to bad weather.  This weather delay meant that we had to cut some oceanographic stations we would like to have sampled, and even when we made it out of the harbor, the rough weather made it impossible to sample some of the stations we still had left on our map.  That being said, we still got a lot of good work done!

The original station map. The warm colors are the west coast of the US, the cold colors are the ocean, and the black dots are planned survey stations

The oceanographers were able to conduct CTD casts at most planned stations, as well as sample the water column with a vertical zooplankton net, a HAB net (for looking for the organisms that cause Harmful Algal Blooms),  and a Bongo Net (a net that specializes in getting horizontal samples of the water column).  When it wasn’t too windy, they were also able to sample with the Manta net (a net specialized for surface sampling – it looks like a manta ray’s mouth) and at certain near-shore stations they did manage to get some bottom beam trawls in to look at the benthic community of fishes and invertebrates.  All this was done while dodging multitudes of crab pots and storm fronts.  The NOAA corps officers who drive the boat, and the deck crew who handle all the equipment deployments and retrievals really did their utmost to make sure we were able to work.

Stormy seas make for difficult sampling conditions! photo credit: Florence Sullivan

For my part, I spent the hours between stations searching the wind-tossed waves for any sign of marine mammals. Over the course of the week, I saw a few Northern fur seals, half a dozen gray whales, and a couple of unidentified large cetaceans.  When you think about the productivity of the North Pacific Ecosystem this may not seem like very much.  But remember, it is late winter, and I do not have x-ray vision to see through the waves.  It is likely that I missed a number of animals simply because the swell was too large, and when we calculate our “detection probability” these weather factors will be taken into account. In addition, many of our local marine mammals are migrators who might be in warmer climates, or are off chasing different food sources at the moment.  In ecology, when you want to know how a population of animals is distributed across a land- or sea-scape, it is just as important to understand where the animals are NOT as where they ARE. So all of this “empty” water was very important to survey simply because it helps us refine our understanding of where animals don’t want to be.  When we know where animals AREN’T we can ask better questions about why they occur where they ARE.

Black Footed Albatross soars near the boat. Photo credit: Florence Sullivan

Notable species of the week aside from the marine mammals include Laysan and Black Footed Albatrosses, a host of Vellella vellella (sailor by the wind hydroid colonies) and the perennial favorite of oceanographers; the shrinking Styrofoam cup.  (See pictures)

We sent these styrofoam cups down to 1800 meters depth. The pressure at those depths causes all the air to escape from the styrofoam, and it shrinks! This is a favorite activity of oceanographers to demonstrate the effects on increased pressure!

These sorts of interdisciplinary cruises are quite fun and informative to participate in because we can build a better picture of the ecosystem as a whole when we use a multitude of methods to explore it.  This strength of cooperation makes me proud to add my little piece to the puzzle. As I move forward in life, whether I get to be the marine mammal observer, the oceanographer, or perhaps an educator, I will always be glad to contribute to collaborative research.

 

Beyond the Rock: Using Satellite Trackers to Study the Lives of Common Murres

By Stephanie Loredo, Seabird Oceanography Lab, OSU

Photo credit: Seabird Oceanography Lab

Common murres (Uria aalgee) are the most abundant seabird on the Oregon Coast. At least half of the population in the California Current Ecosystem breeds on the Oregon Coast (half a million seabirds). This makes them ecologically important consumers of forage fish, especially during the breeding season when they use state-waters.

While they spend most of their time at sea, murres must come to shore to breed. During this time, they are highly visible by humans as they breed in large masses on rocky islands. While they are not the most agile on land, due to their short and stubby legs, they are actually amazing divers. Their short flipper-like wings help them swim, and they typically reach depths of 30-60m to catch their prey.

Aside from their underwater aviation skills, they make great parents as well. Both parents will incubate and care for their chick – murres only lay one egg a year – until they fledge; once they leave the rock, male murres take full responsibility for their chicks while the moms go on vacation (they worked hard to lay the egg so they need some time to recuperate). After the breeding season, murres leave the rock in large quantities – this is often the last time humans will see them this year in large aggregations from shore.

Despite their omnipresence and importance as a marine predator in Oregon, there is still a lot we don’t know about murres. Where do murres go when they are not breeding? Do they migrate? Where do they feed during the breeding and non-breeding period? What habitat characteristics are associated with feeding areas? By answering these questions, we increase knowledge of murre ecology in Oregon. Moreover, a more comprehensive understanding of the year-round movements of murres aids marine spatial planners take more informed actions on the current decisions regarding offshore renewable energy development. This is what I hope to achieve through my Masters research project at OSU.

Most of what is known about the offshore distribution of murres in Oregon comes from vessel observations. However, vessel data only provide snapshots in time, and not a continuous picture of area-use. Within the Seabird Oceanography Lab (SOL), we are using individual satellite tracking devices to follow the movements of murres associated with the Yaquina Head colony, which is a prominent breeding colony in Oregon located near Newport.

A common murre displaying a satellite tag prior to release.

SOL was able to track 15 common murres associated with the Yaquina Head colony in 2015 and 2016.  These tags were deployed periodically throughout the breeding period and have been successful in tracking birds for up to three months. Thus far, we have tracking data ranging from May to December (only one bird tracked during December).

Tracking data from 2015 and 2016 of murres off the Yaquina Head colony provide an interesting comparison.  In both years, murres experienced warmer ocean conditions, high Bald eagle disturbance rates, and consequently high Western gull egg predation at the colony. Some data also indicate low prey availability.  The combination of all these factors is most likely the reason for the observed reproductive failure at the colony in both years. Tracking data showed that 13 of the 15 birds tagged dispersed from the colony earlier than expected. The maps below summarize the dispersal of birds by year and by time of deployment.

 

Each map (Left: 2015, Right: 2016) illustrates all birds that dispersed from the colony and did not engage in central-place foraging (feeding trips to and from the colony). Sample size: n2015=7, n2016_spring=1, n2016_summer=3.

Most birds made a northward movement and traveled as far north as British Columbia, Canada.  Along their movement north, they used inlets and bays, but one of the most prominent areas used was the Columbia River plume. Birds used the Columbia River mouth area during the summer and fall, with the most time spent there during the summer. Dispersal from the colony was not what we expected; we expected individuals to breed on colony and engage in central-place foraging  (feeding to and from the breeding site) nearshore until mid-August when they usually leave the rock. However, we are still interested in the habitat characteristics of feeding areas and the conditions that led to movement from one feeding area to the next.

Prior to examining habitat associations of murre feeding areas, we must first determine their behavior state at each point location derived from the satellite tags.  After data cleaning and filtering out erroneous locations, we applied a behavioral analysis (Residence in Space and Time method) to determine behaviors associated with each point location. This analysis has allowed us to distinguish between intensive foraging, transiting, and extensive foraging. Extensive foraging locations can be interpreted as a set of locations that are mostly spread out in space, where murres searched for prey. On the other hand, intensive foraging locations can be interpreted as a set of locations that are very close together in space where murres likely found prey, and thus spent more time.

We are finalizing the extraction of environmental data for each point location from satellite data. Once all data are extracted, we can begin analysis for determining what environmental conditions were sought during dispersal and what types of habitats are preferred. Some of the ocean conditions that will be examined are sea surface temperate, wind, upwelling index, and primary net productivity. Some other habitat descriptors we are interested in assessing are substrate, distance to river mouth, salinity, depth, distance to the 200-m isobath, and distance to shore. For now, exploration of data indicates differences in habitat associations by behavior and between seasons.

Sample size means everything in a study like this so I am happy to say that more data is yet to come: SOL plans to deploy 15 more tags during spring and summer of 2017. I am excited to see what the additional tagged murres will do, and whether they will follow a pattern similar to those tracked in 2015 and 2016. However this time around, we will deploy tags as late in the summer/early fall as we can, in hope of acquiring some novel winter data to fill this knowledge gap. If we are successful, we may finally have a better idea of what life is like for common murres during more of the year beyond the rock.

 

GEMM Lab 2016: A Year in the Life

By Dawn Barlow, MSc Student, Department of Fisheries and Wildlife, Oregon State University

The year is rapidly coming to a close, and what a busy year it has been in the Geospatial Ecology of Marine Megafauna Lab! In 2016, our members have traveled to six continents for work (all seven if we can carry Rachael’s South African conference over from the end of 2015…), led field seasons in polar, temperate, and tropical waters, presented at international conferences, processed and analyzed data, and published results. Now winter finds us holed up in our offices in Newport, and various projects are ramping up and winding down. With all of the recent turmoil 2016 has brought, it is a nice to reflect on the good work that was accomplished over the last 12 months. In writing this, I am reminded of how grateful I am to work with this talented group of people!

The year started with a flurry of field activity from our southern hemisphere projects! Erin spent her second season on the Antarctic peninsula, where she contributed to the Palmer Station Long Term Ecological Research Project.

Erin collecting a crabeater seal scat sample.
Erin in action collecting a crabeater seal scat sample along the West Antarctic Peninsula.

 

Aerial image of the research vessel and a pair of blue whales during the 2016 New Zealand survey.
Aerial image of the research vessel and a pair of blue whales during the 2016 New Zealand survey.

The New Zealand blue whale project launched a comprehensive field effort in January and February, and it was a fruitful season to say the least. The team deployed hydrophones, collected tissue biopsy and fecal samples, and observed whales feeding, racing and nursing. The data collected by the blue whale team is currently being analyzed to aid in conservation efforts of these endangered animals living in the constant presence of the oil and gas industry.

Midway atoll is home to one of the largest albatross colony in the world, and Rachael visited during the winter breeding season. In addition to deploying tracking devices to study flight heights and potential conflict with wind energy development, she became acutely aware of the hazards facing these birds, including egg predation by mice and the consumption of plastic debris.

Laysan albatross equipped with a GPS data logger.
Laysan albatross equipped with a GPS data logger.

Fledgling from last year with a stomach full of plastic.
Fledgling from last year with a stomach full of plastic.

Early summertime brought red-legged kittiwakes to the remote Pribilof Islands in Alaska to nest, and Rachael met them there to study their physiology and behavior.

Rachael with a noosepole on St. George Island, Alaska
Rachael with a noosepole on St. George Island, Alaska

Solene with Dr. Claire Garrigue during fieldwork at the Chesterfield Reefs, New Caledonia.
Solene with Dr. Claire Garrigue during fieldwork at the Chesterfield Reefs, New Caledonia.

As the weather warmed for us in the northern hemisphere, Solene spent the austral winter with the humpback whales on their breeding grounds in New Caledonia. Her team traveled to the Chesterfield Reefs, where they collected tissue biopsy samples and photo-IDs, and recorded the whale’s songs. But Solene studies far more than just these whales! She is thoroughly examining every piece of environmental, physical, and oceanographic data she can get her hands on in an effort to build a thorough model of humpback whale distribution and habitat use.

A humpback whale in New Caledonia's South Lagoon.
A humpback whale in New Caledonia’s South Lagoon.

Summertime came to Oregon, and the gray whales returned to these coastal waters. Leigh, Leila, and Todd launched into fieldwork on the gray whale stress physiology project. The poop-scooping, drone-flying team has gotten a fair bit of press recently, follow this link to listen to more!

The overhead drone captures a pair of gray whales surfacing between kelp beds off Cape Blanco, Oregon, with the research vessel nearby. Take under NOAA/NMFS permit #16111 given to John Calambokidis.
The overhead drone captures a pair of gray whales surfacing between kelp beds off Cape Blanco, Oregon, with the research vessel nearby. Take under NOAA/NMFS permit #16111 given to John Calambokidis.

And while Leigh, Leila, and Todd followed the grays from the water, Florence and her team watched them from shore in Port Orford, tracking their movement and behavior. In an effort to gain a better understanding of the foraging ecology of these whales, Florence and crew also sampled their mysid prey from a trusty research kayak.

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Florence and the summer 2016 gray whale field team.

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Kelli Iddings sampling mysid near Port Orford.

With the influx of gray whales came an influx of new and visiting GEMM Lab members, as Florence’s team of interns joined for the summer season. I was lucky enough to join this group as the lab’s newest graduate student!

All summer 2016 GEMM Lab members.
All of the summer 2016 GEMM Lab members.

Our members have presented their work to audiences far and wide. This summer Leigh, Amanda, and Florence attended the International Marine Conservation Congress, and Amanda was awarded runner-up for the best student presentation award! Erin traveled to Malaysia for the Scientific Convention on Antarctic Research, and Rachael and Leigh presented at the International Albatross and Petrel Conference in Barcelona. With assistance from Florence and Amanda, Leigh led an offshore expedition on OSU’s research vessel R/V Oceanus to teach high school students and teachers about the marine environment.

Amanda with her award!
Amanda with her award!

Science Party musters in the dry lab for safety debrief aboard R/V Oceanus.
Science Party musters in the dry lab for safety debrief aboard R/V Oceanus.

Courtney fledged from the GEMM Lab nest before 2016 began, but the work she did while here was published in Marine Mammal Science this year. Congrats Courtney! And speaking of publications, additional congratulations to Solene for her publication in Marine Ecology Progress Series, Rachael for her four publications this year in PLOS ONE, Marine Ecology Progress Series, Marine Ornithology, and the Journal of Experimental Biology, and Leigh for her five publications this year in Polar Biology, Diversity and Distributions, Marine Ecology Progress Series, and Marine Mammal Science!

Wintertime in Newport has us tucked away indoors with our computers, cranking through analyses and writing, and dreaming about boats, islands, seabirds, and whales… Solene visited from the South Pacific this fall, and graced us with her presence and her coding expertise. It is a wonderful thing to have labmates to share ideas, frustrations, and accomplishments with.

No heat in the lab can't stop us from solving a coding problem together on a wintery evening!
Solving a coding problem together on a wintery evening.

As the year comes to a close, we have two newly-minted Masters of Science! Congratulations to Amanda and Erin on successfully defending their theses, and stay tuned for their upcoming publications!

Amanda's post-defense celebration!
Amanda’s post-defense celebration!

Erin's post-defense celebration!
Erin’s post-defense celebration!

We are looking forward to what 2017 brings for this team of marine megafauna enthusiasts. Happy holidays from the GEMM Lab!

Happy GEMM Lab members.
Happy GEMM Lab members, enjoying one another’s company and playing Evolution.

Oceanus Day Three: Dolphin Delights

by Florence Sullivan, MSc student

Our third day aboard the Oceanus began in the misty morning fog before the sun even rose. We took the first CTD cast of the day at 0630am because the physical properties of the water column do not change much with the arrival of daylight. Our ability to visually detect marine mammals, however, is vastly improved with a little sunlight, and we wanted to make the best use of our hours at sea possible.

Randall Munroe www.XKCD.com

Our focus on day three was the Astoria canyon – a submarine feature just off the Oregon and Washington coast. Our first oceanographic station was 40 miles offshore, and 1300 meters deep, while the second was 20 miles offshore and only 170 meters deep.  See the handy infographic below to get a perspective on what those depths mean in the grand scheme of things.  From an oceanographic perspective, the neatest finding of the day was our ability to detect the freshwater plume coming from the Columbia River at both those stations despite their distance from each other, and from shore! Water density is one of the key characteristics that oceanographers use to track parcels of water as they travel through the ocean conveyor belt. Certain bodies of water (like the Mediterranean Sea, or the Atlantic or Pacific Oceans) have distinct properties that allow us to recognize them easily. In this case, it was very exciting to “sea” the two-layer system we had gotten used to observing overlain with a freshwater lens of much lower salinity, higher temperature, and lower density. This combination of freshwater, saltwater, and intriguing bathymetric features can lead to interesting foraging opportunities for marine megafauna – so, what did we find out there?

Click through link for better resolution: Randall Munroe www.XKCD.com/1040/large

Morning conditions were almost perfect for marine mammal observations – glassy calm with low swell, good, high, cloud cover to minimize glare and allow us to catch the barest hint of a blow….. it should come as no surprise then, that the first sightings of the day were seabirds and tuna!

I didn't catch any photos of the Tuna, so here's some mola mola we spotted. photo credit: Florence Sullivan
I didn’t catch any photos of the tuna, so here’s some sunfish we spotted. photo credit: Florence Sullivan

One of the best things about being at sea is the ability to look out at the horizon and have nothing but water staring back at you. It really drives home all the old seafaring superstitions about sailing off the edge of the world.  This close to shore, and in such productive waters, it is rare to find yourself truly alone, so when we spot a fishing trawler, there’s already a space to note it in the data log.  Ships at sea often have “follower” birds – avians attracted by easy meals as food scraps are dumped overboard. Fishing boats usually attract a lot of birds as fish bycatch and processing leftovers are flushed from the deck.  The birders groan, because identification and counts of individuals get more and more complicated as we approach other vessels.  The most thrilling bird sighting of the day for me were the flocks of a couple hundred fork-tailed storm petrels.

Fork-tailed storm petrels
Fork-tailed storm petrels. photo credit: Florence Sullivan

I find it remarkable that such small birds are capable of spending 80% of their life on the open ocean, returning to land only to mate and raise a chick. Their nesting strategy is pretty fascinating too – in bad foraging years, the chick is capable of surviving for several days without food by going into a state of torpor. (This slows metabolism and reduces growth until an adult returns.)

Just because the bird observers were starting to feel slightly overwhelmed, doesn’t mean that the marine mammal observers stopped their own survey.  The effort soon paid off with shouts of “Wait! What are those splashes over there?!” That’s the signal for everyone to get their binoculars up, start counting individuals, and making note of identifying features like color, shape of dorsal fin, and swimming style so that we can make an accurate species ID. The first sighting, though common in the area, was a new species for me – Pacific white sided dolphins!

Pacific white sided dolphin
A Pacific white sided dolphin leaps into view. photo credit: Florence Sullivan. Taken under NMFS permit 16111 John Calambokidis

A pod of thirty or so came to ride our bow wake for a bit, which was a real treat. But wait, it got better! Shortly afterward, we spotted more activity off the starboard bow.  It was confusing at first because we could clearly see a lot of splashes indicating many individuals, but no one had glimpsed any fins to help us figure out the species. As the pod got closer, Leigh shouted “Lissodelphis! They’re lissodelphis!”  We couldn’t see any dorsal fins, because northern right whale dolphins haven’t got one! Then the fly bridge became absolute madness as we all attempted to count how many individuals were in the pod, as well as take pictures for photo ID. It got even more complicated when some more pacific white sided dolphins showed up to join in the bow-riding fun.

Northern right whale dolphins are hard to spot! photo credit: Florence Sullivan Taken under NMFS permit 16111 John Calambokidis
Northern right whale dolphins are hard to spot! photo credit: Florence Sullivan Taken under NMFS permit 16111 John Calambokidis

All told, our best estimates counted about 200 individuals around us in that moment. The dolphins tired of us soon, and things continued to calm down as we moved further away from the fishing vessels.  We had a final encounter with an enthusiastic young humpback who was breaching and tail-slapping all over the place before ending our survey and heading towards Astoria to make our dock time.

Humpback whale breach
Humpback whale breach. photo credit: Florence Sullivan. Taken under NMFS permit 16111 John Calambokidis

As a Washington native who has always been interested in a maritime career, I grew up on stories of The Graveyard of the Pacific, and how difficult the crossing of the Columbia River Bar can be. Many harbors have dedicated captains to guide large ships into the port docks.  Did you know the same is true of the Columbia River Bar?  Conditions change so rapidly here, the shifting sands of the river mouth make it necessary for large ships to receive a local guest pilot (often via helicopter) to guide them across.  The National Motor Lifeboat School trains its students at the mouth of the river because it provides some of “the harshest maritime weather conditions in the world”.  Suffice it to say, not only was I thrilled to be able to detect the Columbia River plume in our CTD profile, I was also supremely excited to finally sail across the bar.  While a tiny part of me had hoped for a slightly more arduous crossing (to live up to all the stories you know), I am happy to report that we had glorious, calm, sunny conditions, which allowed us all to thoroughly enjoy the view from the fly bridge.

Cape Disappointment Lighthouse at the Columbia River Bar.
Cape Disappointment Lighthouse at the Columbia River Bar.

Finally, we arrived in Astoria, loaded all our gear into the ship’s RHIB (Ridged Hulled Inflatable Boat), lowered it into the river, descended the rope ladder, got settled, and motored into port. We waved goodbye to the R/V Oceanus, and hope to conduct another STEM cruise aboard her again soon.

Now if the ground would stop rolling, that would be just swell.

Last but not least, here are the videos we promised you in Oceanus Day Two – the first video shows the humpback lunge feeding behavior, while the second shows tail slapping. Follow our youtube channel for more cool videos!